Xanthomonas oryzae pv. oryzae PXO236 |
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Putative Xanthomonas oryzae pv. oryzae PXO236 RM systems
Ref: Quibod,I.L. and Oliva,R. unpublished
REBASE ref # 22872
Complete sequence: 4,968,717 bp
GenBank #: CP013675
REBASE acronym: Xor236
Org_num: 20545
All begin ATY45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5900 | plasmid stabilization protein | |||
| 5905 | S | S.XorYN10ORF7750P (96% identity) | CAANNNNNNNNTGGA | S.Xor236ORF5910P |
| 5910 | M | M.XorYN10ORF7750P (100% identity) | CAANNNNNNNNTGGA | M.Xor236ORF5910P |
| 5915 | abortive infection protein | |||
| 5920 | R | Xor112ORF4430P (100% identity) | CAANNNNNNNNTGGA | Xor236ORF5910P |
| 5925 | pseudogene | |||
| ??? | restriction endonuclease | |||
| 5940 | M | M.XorCR15ORF18285P (100% identity) | M.Xor236ORF5940P | |
| 5945 | 144 aa hypothetical protein | |||
| 5950 | S | S.Xor112ORF4400P (48% identity) | S.Xor236ORF5940P | |
| 5955 | R | Xor112ORF4400P (100% identity) | Xor236ORF5940P | |
| 5960 | 88 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20355 | integrase | |||
| 20360 | R | XorO79ORF8580P (100% identity) | CGATCG | Xor236ORF20365P |
| ??? | M | M.XorN37ORF3120P (100% identity) | CGATCG | M.Xor236ORF20365P |
| ??? | V | V.XorPXO61ORF3170P (100% identity) | V.Xor236ORF20365P | |
| 20370 | 194 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2525 | alpha/beta hydrolase | |||
| 2530 | R | XorYN24ORF9770P (99% identity) | CCGAGG | Xor236ORF2535P |
| 2535 | M | M.XorZ173ORF2630P (100% identity) | CCGAGG | M.Xor236ORF2535P |
| 2540 | addiction module protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5930 | plasmid stabilization protein | |||
| ??? | R | XorZ173MrrP (100% identity) | Xor236MrrP | |
| 5940 | N-6 DNA methylase | |||