Borrelia burgdorferi 118a |
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Putative Borrelia burgdorferi 118a RM systems
Ref: Fraser-Liggett,C.M. et al. unpublished
REBASE ref # 10954
| Sequence length: | GenBank #: | |
| plasmid 118a_lp25: | 24,765 bp | CP001532 (NC_012238) |
| plasmid 118a_lp28-3: | 28,746 bp | CP001540 (NC_012236) |
| plasmid 118a_lp28-4: | 29,802 bp | CP001541 (NC_012240) |
| plasmid 118a_lp28-5: | 27,336 bp | CP001529 (NC_012248) |
| plasmid 118a_lp28-6: | 29,233 bp | CP001531 (NC_012233) |
| plasmid 118a_lp36: | 27,241 bp | CP001537 (NC_012245) |
| plasmid 118a_lp38: | 27,759 bp | CP001539 (NC_012232) |
REBASE acronym: Bbu118
Org_num: 5356
All begin BBU118A_E, BBU118A_H, BBU118A_I, BBU118A_J, BBU118A_K, BBU118A_Y, BBU118A_Z
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid 118a_lp25 | ||||
| 2 | replicative DNA helicase | |||
| 3 | RM | Bbu156ORF2P (96% identity) | Bbu118ORF3P | |
| 4 | outer membrane protein | |||
| 18 | Borrelia membrane protein P13 | |||
| 19 | RM | adenine specific DNA methyltransferase | Bbu118ORF19P | |
| 20 | 297 aa conserved hypothetical protein | |||
| plasmid 118a_lp28-3 | ||||
| 6 | 46 aa conserved hypothetical protein | |||
| 7 | RM | BbuB379ORF6100P (99% identity) | Bbu118ORF7P | |
| 8 | 41 aa conserved hypothetical protein | |||
| plasmid 118a_lp28-4 | ||||
| 27 | 58 aa conserved hypothetical protein | |||
| 28 | RM | 317 aa conserved hypothetical protein | Bbu118ORF28P | |
| 29 | lipoprotein | |||
| plasmid 118a_lp28-5 | ||||
| 5 | 67 aa hypothetical protein | |||
| 6 | RM | Bbu64bORF7P (100% identity) | Bbu118ORF6P | |
| 7 | 266 aa conserved hypothetical protein | |||
| 8 | 244 aa hypothetical protein | |||
| 9 | M | M.Bbu64bORF10P (95% identity) | GCGC | M.Bbu118ORF9P |
| 10 | 64 aa hypothetical protein | |||
| plasmid 118a_lp28-6 | ||||
| 2 | exported protein A | |||
| 3 | RM | BbuB500ORF5380P (100% identity) | Bbu118ORFZ3P | |
| 4 | plasmid partition protein | |||
| plasmid 118a_lp36 | ||||
| 16 | 67 aa conserved hypothetical protein | |||
| 17 | RM | type I restriction enzyme r protein | Bbu118ORF17AP | |
| 18 | RM | 76 aa conserved hypothetical protein | Bbu118ORF17BP | |
| 19 | RM | 66 aa conserved hypothetical protein | Bbu118ORF17CP | |
| 20 | RM | 39 aa conserved hypothetical protein | Bbu118ORF17DP | |
| ??? | RM | 85 aa hypothetical protein Bbur8_09517 | Bbu118ORF17EP | |
| ??? | RM | 91 aa hypothetical protein BGP294 | Bbu118ORF17FP | |
| 21 | 47 aa conserved hypothetical protein | |||
| 32 | 47 aa conserved hypothetical protein | |||
| ??? | RM | 91 aa hypothetical protein BGP294 | Bbu118ORF33FP | |
| ??? | RM | 85 aa hypothetical protein Bbur8_09517 | Bbu118ORF33EP | |
| 33 | RM | 39 aa conserved hypothetical protein | Bbu118ORF33DP | |
| 34 | RM | 66 aa conserved hypothetical protein | Bbu118ORF33CP | |
| 35 | RM | 76 aa conserved hypothetical protein | Bbu118ORF33BP | |
| 36 | RM | type I restriction enzyme r protein | Bbu118ORF33AP | |
| 32 | 47 aa conserved hypothetical protein | |||
| ??? | RM | 91 aa hypothetical protein BGP294 | Bbu118ORF36FP | |
| ??? | 85 aa hypothetical protein Bbur8_09517 | |||
| plasmid 118a_lp38 | ||||
| 1 | RM | BbuCAORFAP (100% identity) | Bbu118ORF1P | |
| 2 | 46 aa conserved hypothetical protein | |||