Clostridium taeniosporum 1/k |
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Putative Clostridium taeniosporum 1/k RM systems
Ref: Walker,J.R. unpublished
REBASE ref # 23599
| Sequence length: | GenBank #: | |
| Chromosome: | 3,264,813 bp | CP017253 |
| plasmid pCt2: | 69,744 bp | CP017255 |
| plasmid pCt3: | 163,055 bp | CP017256 |
REBASE acronym: Cta1k
Org_num: 20624
All begin BGI42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2780 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| 2785 | M | M.Tsp806ORF1615P (78% identity) | M.Cta1kORF2785P | |
| 2790 | S | S.Ase987ORF9535P (35% identity) | S.Cta1kORF2785P | |
| 2795 | 796 aa hypothetical protein | |||
| 10535 | 240 aa hypothetical protein | |||
| 10540 | R | CspRORFBP (90% identity) | Cta1kORF10560P | |
| 10545 | 137 aa hypothetical protein | |||
| 10550 | 276 aa hypothetical protein | |||
| 10555 | S | S.CspRORFBP (47% identity) | S.Cta1kORF10560P | |
| 10560 | M | M.CspRORFBP (91% identity) | M.Cta1kORF10560P | |
| 10565 | N-6 DNA methylase | |||
| plasmid pCt2 | ||||
| 14965 | 294 aa hypothetical protein | |||
| 16055 | S | S.Cta1kORF15000P (64% identity) | S.Cta1kORF14980P | |
| 14980 | M | M.Cta1kORF15000P (99% identity) | M.Cta1kORF14980P | |
| 14985 | ATP-binding protein | |||
| 14990 | 219 aa hypothetical protein | |||
| 16060 | S | S.Cta1kORF15000P (50% identity) | S1.Cta1kORF15000P | |
| 16065 | S | S.Cta1kORF15000P (46% identity) | S2.Cta1kORF15000P | |
| 15000 | M | M.Cta1kORF14980P (99% identity) | M.Cta1kORF15000P | |
| 14675 | XRE family transcriptional regulator | |||
| 14680 | ImmA/IrrE family metallo-endopeptidase | |||
| 14685 | 225 aa hypothetical protein | |||
| 14690 | R | R2.Tme16806ORFDP (82% identity) | Cta1kORF15000P | |
| 14695 | 139 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2875 | RNA polymerase subunit sigma-70 | |||
| 2880 | M | M.Csp3679ORFFP (83% identity) | M.Cta1kORF2880P | |
| 2885 | 103 aa hypothetical protein | |||
| 8475 | DUF3578 domain-containing protein | |||
| 8480 | M | M.GacSBH6ORF2162P (28% identity) | CCGG | M.Cta1kORF8480P |
| 8485 | DNA sulfur modification protein DndB | |||
| 8480 | site-specific DNA-methyltransferase | |||
| 8485 | M | M.Cne265DndBP (85% identity) | M.Cta1kDndBP | |
| 8490 | sulfurtransferase DndC | |||
| 8485 | DNA sulfur modification protein DndB | |||
| 8490 | M | M.CboCBUTDndCP (83% identity) | M.Cta1kDndCP | |
| 8495 | DNA sulfur modification protein DndD | |||
| 8490 | sulfurtransferase DndC | |||
| 8495 | M | M.CboCBUTDndDP (83% identity) | M.Cta1kDndDP | |
| 8500 | DUF1832 domain-containing protein | |||
| 8495 | DNA sulfur modification protein DndD | |||
| 8500 | M | M.Cth5974DndEP (89% identity) | M.Cta1kDndEP | |
| 8505 | cysteine desulfurase | |||
| 8500 | DUF1832 domain-containing protein | |||
| 8505 | M | M.Csp275DndAP (85% identity) | M.Cta1kDndAP | |
| 8510 | 168 aa hypothetical protein | |||
| 8525 | 874 aa hypothetical protein | |||
| 8530 | R | Cth5974DptHP (73% identity) | Cta1kDptHP | |
| 8535 | DNA phosphorothioation-dependent restriction | |||
| 8530 | DNA phosphorothioation-dependent restriction | |||
| 8535 | R | CboCBUTDptGP (71% identity) | Cta1kDptGP | |
| 8540 | DNA phosphorothioation-dependent restriction | |||
| 8535 | DNA phosphorothioation-dependent restriction | |||
| 8540 | R | Cth5974DptFP (73% identity) | Cta1kDptFP | |
| 8545 | 74 aa hypothetical protein | |||
| plasmid pCt2 | ||||
| 14880 | peptidase S8 | |||
| 14885 | R | CbaC162ORF3735P (45% identity) | CCGC | Cta1kORF14890P |
| ??? | M | M.CbaC162ORF3735P (35% identity) | CCGC | M.Cta1kORF14890P |
| 16050 | DNA (cytosine-5-)-methyltransferase | |||
| ??? | 322 aa hypothetical protein | |||
| 16050 | M | M.CbaC162ORF3735P (22% identity) | M.Cta1kORF16050P | |
| 14895 | DUF1659 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pCt3 | ||||
| 15770 | 110 aa hypothetical protein | |||
| 15005 | R | CklJZZORF750P (78% identity) | Cta1kORF15010P | |
| 15010 | M | M.Gza12ORF6800P (42% identity) | M.Cta1kORF15010P | |
| 15015 | 78 aa hypothetical protein | |||