Ref: Van Sluys,M.A. et al. J. Bacteriol. 185 (3), 1018-1026 (2003)

REBASE ref # 7940

Complete sequence: 2,519,802 bp

GenBank #: AE009442 (NC_004556)

REBASE acronym: XfaT

Org_num: 3693

 

All begin PD_

Type I
ORF Gene Most similar Specificity Name
 
236 aconitate hydratase 2
239 R XfaM23ORF233P (100% identity) XfaTORF241P
240 S S.Xfav13ORF1230P (99% identity) S.XfaTORF241P
??? M M.XfaWM11ORF1245P (100% identity) M.XfaTORF241P
242 78 aa conserved hypothetical protein
 
2069 141 aa conserved hypothetical protein
2070 R Xfav13ORF11050P (100% identity) XfaTORF2072P
2071 S S.Xfav13ORF11050P (100% identity) S.XfaTORF2072P
2072 M M.Xfav13ORF11050P (100% identity) M.XfaTORF2072P
2073 222 aa conserved hypothetical protein
 
2073 222 aa conserved hypothetical protein
2074 R Xfav13ORF11075P (100% identity) GATCNNNNNNNTGC XfaTIIP
2075 S S.Xfav13ORF11075P (100% identity) GATCNNNNNNNTGC S.XfaTII
2076 M M.Xfav13ORF11075P (100% identity) GATCNNNNNNNTGC M.XfaTII
2077 amino acid transporter
Type II
ORF Gene Most similar Specificity Name
 
576 histidine kinase/response regulator hybrid
577 M M.Xfav13ORF3100P (100% identity) GTCGAC M.XfaTORF577P
578 R R1.Xfav13ORF3100P (93% identity) GTCGAC XfaTORF577P
579 366 aa conserved hypothetical protein
 
1061 DNA-damage-inducible protein D
1062 M M.Xfav13ORF5610P (99% identity) GCATGC M.XfaTORF1062P
1063 190 aa conserved hypothetical protein
 
1323 phage-related lysozyme
1324 M M.Xfav13ORF7095P (100% identity) M.XfaTORF1324P
1325 excinuclease ABC subunit C
 
1338 low molecular weight phosphotyrosine protein
1339 M M.Xfav13ORF7170P (100% identity) M.XfaTORF1339P
1340 proteic killer suppression protein
 
1605 pseudogene
1607 M M.Xfav25ORF3130P (100% identity) TTCGAA M.XfaTI
1608 R Xfav25ORF3130P (100% identity) TTCGAA XfaTIP
1610 type IV pilin
 
1647 DNA primase
??? R XfasORF3006P (100% identity) CCSGG XfaTORF1649P
??? M M.XfaSLORFIP (100% identity) CCSGG M.XfaTORF1649P
1650 tryptophanyl-tRNA synthetase
Type III
ORF Gene Most similar Specificity Name
 
832 3-oxoacyl-[ACP] synthase III
833 M M.Xfav13ORF4440P (100% identity) M.XfaTORF833P
834 72 aa conserved hypothetical protein
835 R Xfav13ORF4440P (100% identity) XfaTORF833P
836 haloalkane dehalogenase
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