Pseudomonas aeruginosa PA_D1 |
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Putative Pseudomonas aeruginosa PA_D1 RM systems
Ref: Ding,Y. unpublished
REBASE ref # 22582
Complete sequence: 6,643,823 bp
GenBank #: CP012585
REBASE acronym: PaeD1
Org_num: 20293
All begin AM599_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20405 | 120 aa hypothetical protein | |||
| 20410 | M | M.PaeJH12ORF20140P (100% identity) | M.PaeD1ORF20410P | |
| 20415 | S | S.PaePA02ORF10266P (100% identity) | S.PaeD1ORF20410P | |
| 20420 | R | PaeJH12ORF20140P (100% identity) | PaeD1ORF20410P | |
| 20425 | transcriptional regulator | |||
| 22540 | OLD family endonuclease | |||
| 22545 | S | S.PaeD9ORF22560P (100% identity) | S.PaeD1ORF22550P | |
| 22550 | M | M.Pfl10783I (100% identity) | M.PaeD1ORF22550P | |
| 22555 | recombinase RmuC | |||
| 22560 | 125 aa hypothetical protein | |||
| 22565 | R | PaePa150ORF22155P (99% identity) | PaeD1ORF22550P | |
| 22570 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5655 | 99 aa hypothetical protein | |||
| 5660 | M | M.PaeL1ORF5610P (100% identity) | M.PaeD1ORF5660P | |
| 5665 | phosphohydrolase | |||
| 5875 | 86 aa hypothetical protein | |||
| 5880 | M | M.PaeLo565ORF6155P (100% identity) | M.PaeD1ORF5880P | |
| 5885 | 88 aa hypothetical protein | |||
| 6970 | 81 aa hypothetical protein | |||
| ??? | M | M.PaeS1ORF3886P (100% identity) | M.PaeD1ORF6975P | |
| 6980 | glycoside hydrolase | |||
| 7195 | 86 aa hypothetical protein | |||
| 7200 | M | M1.PaeH08ORFBP (100% identity) | M.PaeD1ORF7200P | |
| ??? | RNA methyltransferase | |||
| 7200 | restriction endonuclease subunit M | |||
| ??? | M | M2.PaeH08ORFBP (95% identity) | CTGCAG | M.PaeD1ORF7205P |
| ??? | R | PaeD9ORF9925P (100% identity) | CTGCAG | PaeD1ORF7205P |
| 7215 | TolB-like translocation protein | |||
| 11510 | 70 aa hypothetical protein | |||
| ??? | M | M.PaeD9ORF14235P (100% identity) | M.PaeD1ORF11515P | |
| 11525 | 79 aa hypothetical protein | |||
| 12180 | 255 aa hypothetical protein | |||
| ??? | M | M.PaeD9ORFAP (100% identity) | M.PaeD1ORFAP | |
| 12185 | 63 aa hypothetical protein | |||
| 28120 | RNA polymerase subunit sigma | |||
| 28125 | M | M1.PaeD9ORF28135P (100% identity) | M1.PaeD1ORF28125P | |
| 28130 | M | M2.PaeD9ORF28135P (100% identity) | M2.PaeD1ORF28125P | |
| 28135 | 122 aa hypothetical protein | |||
| 28315 | helicase | |||
| 28320 | M | M.PaeD9ORF28330P (100% identity) | M.PaeD1ORF28320P | |
| 28325 | ATPase | |||