Escherichia coli CFSAN004177 |
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Putative Escherichia coli CFSAN004177 RM systems
Ref: Lorenz,S.C. et al. unpublished
REBASE ref #
| Sequence length: | GenBank #: | |
| Chromosome: | 5,191,331 bp | CP014670 |
| plasmid pCFSAN004177G_03: | 96,228 bp | CP012494 |
| plasmid pCFSAN004177P_02: | 52,297 bp | CP012495 |
REBASE acronym: Eco4177
Org_num: 20280
All begin CFSAN004177_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3560 | 65 aa hypothetical protein | |||
| 3565 | M | M.Sen7113ORF20540P (100% identity) | M.Eco4177ORF3565P | |
| 3570 | flagella biosynthesis regulator | |||
| 3850 | protein ninE | |||
| 3855 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco4177ORF3855P |
| 3860 | ninB protein | |||
| 9240 | Fis family transcriptional regulator | |||
| 9245 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco4177ORF9245P |
| 9250 | DUF2556 domain-containing protein | |||
| 9815 | ribulose-phosphate 3-epimerase | |||
| 9820 | M | M.UbaC1152DamP (99% identity) | GATC | M.Eco4177DamP |
| 9825 | cell division protein DamX | |||
| 13460 | 183 aa hypothetical protein | |||
| 13465 | M | M.Eco4176ORF13100P (100% identity) | M.Eco4177ORF13465P | |
| 13470 | Eae protein | |||
| 15580 | transposase | |||
| 15585 | M | 90 aa hypothetical protein | M.Eco4177ORF15585P | |
| 15590 | DEAD/DEAH box helicase | |||
| 15670 | 162 aa hypothetical protein | |||
| 15675 | M | M.Eco4196ORFNP (100% identity) | GATC | M.Eco4177ORF15675P |
| 15680 | crossover junction endodeoxyribonuclease | |||
| 19875 | 27 aa hypothetical protein | |||
| 19880 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco4177ORF19880P |
| 19885 | cruciferin | |||
| 22510 | phosphohydrolase | |||
| 22515 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4177DcmP |
| 22520 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco4177DcmP |
| 22525 | drug/metabolite exporter YedA | |||
| 23045 | TrmB family transcriptional regulator | |||
| 23050 | M | M.EcoZ1836ORF11435P (100% identity) | M.Eco4177ORF23050P | |
| 23070 | Shiga toxin subunit A | |||
| 26610 | 98 aa hypothetical protein | |||
| 5 | M | M.EcoST130ORF9760P (58% identity) | M.Eco4177ORF5P | |
| 10 | 94 aa hypothetical protein | |||
| plasmid pCFSAN004177G_03 | ||||
| 27045 | 63 aa hypothetical protein | |||
| 27065 | M | M.EcoFu022ORF23585P (100% identity) | M.Eco4177ORF27065P | |
| 27070 | recombination-associated protein RdgC | |||
| plasmid pCFSAN004177P_02 | ||||
| 27350 | conjugal transfer protein TraI | |||
| 27355 | M | M.Eco4196ORFMP (100% identity) | M.Eco4177ORF27355P | |
| 27360 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11265 | 0 aa hypothetical protein | |||
| ??? | R | Ecow264ORF380P (100% identity) | GTCTC | Eco4177ORF11275P |
| 11275 | M | M.Eco4196I (99% identity) | GTCTC | M.Eco4177ORF11275P |
| 11280 | 612 aa hypothetical protein | |||
| 15025 | 97 aa hypothetical protein | |||
| ??? | R | EcoE24377ORF3323P (100% identity) | ACCACC | Eco4177ORF15035P |
| 15035 | M | M.Eco4196ORFJBP (100% identity) | ACCACC | M.Eco4177ORF15035BP |
| 15040 | transposase | |||
| 15045 | transposase | |||
| 15050 | M | DNA methylase N-4 | ACCACC | M.Eco4177ORF15035AP |
| 15055 | peptidase S8 | |||