Streptococcus pneumoniae D122 |
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Putative Streptococcus pneumoniae D122 RM systems
Ref: Rieger,M. and Hakenbeck,R. unpublished
REBASE ref # 22438
Complete sequence: 2,088,118 bp
GenBank #: CP016632
REBASE acronym: Spn122
Org_num: 20135
All begin SPND122_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2192 | 49 aa hypothetical protein | |||
| ??? | S | S.SpnHUOHORFAP (46% identity) | S1.Spn122ORF514P | |
| 509 | S | Type I restriction-modification system, | S2.Spn122ORF514P | |
| 510 | Mobile element protein | |||
| 511 | S | S2.SpnPne3ORF5520P (100% identity) | S3.Spn122ORF514P | |
| 512 | S | S1.Spnp2ORF4750P (45% identity) | S4.Spn122ORF514P | |
| 513 | S | Phosphoglycerate kinase | S5.Spn122ORF514P | |
| 514 | M | M.Spns521I (100% identity) | M.Spn122ORF514P | |
| 515 | R | Spnp1ORF4630P (100% identity) | Spn122ORF514P | |
| 516 | 42 aa hypothetical protein | |||
| 871 | Substrate-specific component BioY of biotin ECF | |||
| 872 | M | M.SpnD141ORF875P (100% identity) | M.Spn122ORF872P | |
| 873 | S | S1.SpnD141ORF875P (100% identity) | S1.Spn122ORF872P | |
| 874 | S | S2.Spn6372ORF783P (87% identity) | S2.Spn122ORF872P | |
| 875 | Prevent host death protein, Phd antitoxin | |||
| 876 | Death on curing protein, Doc toxin | |||
| 877 | Tyrosine recombinase XerC | |||
| ??? | S | S.SpnTORF1314AP (36% identity) | S3.Spn122ORF872P | |
| ??? | R | SpnN214ORF4780P (100% identity) | Spn122ORF872P | |
| 880 | Substrate-specific component BioY of biotin ECF | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1254 | pseudogene | |||
| 1255 | R | SpnD141ORF1255P (100% identity) | GCATC | Spn122ORF1256P |
| ??? | M | M.SpnSP23ORF5020P (33% identity) | GCATC | M1.Spn122ORF1256P |
| ??? | M | M.SpnD141ORF1255P (56% identity) | GCATC | M2.Spn122ORF1256P |
| 1257 | 121 aa hypothetical protein | |||
| 1373 | pseudogene | |||
| ??? | R | SpnV0139ORF8175P (100% identity) | TCTAGA | Spn122ORF1376P |
| 1376 | M | M.Spns521III (100% identity) | TCTAGA | M.Spn122ORF1376P |
| 1377 | GMP synthase (glutamine-hydrolyzing), | |||
| 1777 | Xanthine permease | |||
| 1778 | R | SpnPORF1849P (100% identity) | GATC | Spn122ORF1779P |
| 1779 | M | DNA modification methyltransferase | GATC | M1.Spn122ORF1779P |
| 1780 | M | M2.SpnD141ORF1793P (100% identity) | GATC | M2.Spn122ORF1779P |
| 1781 | Phenylacetic acid degradation protein PaaD, | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2241 | GMP reductase | |||
| 1214 | R | SpnD141McrCP (100% identity) | Spn122McrCP | |
| 1215 | R | SpnD141McrBP (89% identity) | Spn122McrBP | |
| 1216 | Endonuclease | |||