Clostridium difficile R20291 |
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Putative Clostridium difficile R20291 RM systems
Ref: Stabler,R.A. et al. unpublished
REBASE ref # 15085
Complete sequence: 4,191,339 bp
GenBank #: FN545816 (NC_013316)
REBASE acronym: CdiR
Org_num: 5600
All begin CDR20291_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2908 | uncharacterized protein | |||
| 2909 | R | Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | CdiRORF2912P |
| 2910 | 142 aa hypothetical transmembrane protein | |||
| 2911 | S | S.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | S.CdiRORF2912P |
| 2912 | M | M.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | M.CdiRORF2912P |
| 2913 | tagatose-1,6-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2645 | phospholipase | |||
| 2646 | M | M.Cdo072ORF14340P (100% identity) | CAAAAA | M.CdiRORF2646P |
| 2647 | 132 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1999 | sigma-54-dependent transcriptional | |||
| 2000 | R | Cdo072McrCP (100% identity) | CdiRMcrCP | |
| 2001 | R | Cdo072McrBP (100% identity) | CdiRMcrBP | |
| 2002 | 240 aa hypothetical protein | |||