Pasteurellaceae bacterium NI1060 |
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Putative Pasteurellaceae bacterium NI1060 RM systems
Ref: Darzi,Y. et al. PLoS ONE 11 (7), E0158866 (2016)
REBASE ref # 22448
Complete sequence: 2,554,082 bp
GenBank #: CP013830
REBASE acronym: Pba1060
Org_num: 19921
All begin AC062_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2471 | pseudogene | |||
| 276 | R | RheG1IP (97% identity) | Pba1060ORF278P | |
| 277 | S | S.RheG1I (62% identity) | S.Pba1060ORF278P | |
| 278 | M | M.RheG1I (97% identity) | M.Pba1060ORF278P | |
| 279 | 275 aa hypothetical protein | |||
| 2457 | 63 aa hypothetical protein | |||
| 2458 | M | M.HpaSH03ORF4290P (75% identity) | M.Pba1060ORF2458P | |
| 2459 | S | S.GpaHPS12ORF5150P (41% identity) | S.Pba1060ORF2458P | |
| 2460 | 306 aa hypothetical protein | |||
| 2461 | 153 aa hypothetical protein | |||
| 2462 | R | Hpa12939ORF775P (15% identity) | Pba1060ORF2458AP | |
| 2463 | pseudogene | |||
| 1 | 58 aa hypothetical protein | |||
| 2 | R | Type I restriction-modification system, | Pba1060ORF2458BP | |
| 3 | 2-keto-3-deoxy-D-arabino-heptulosonate-7- | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 677 | Periplasmic thiol:disulfide oxidoreductase DsbB, | |||
| 678 | H | H.Hpa3258ORF2375P (79% identity) | H.Pba1060ORF680P | |
| 679 | R | Nmu19696ORF1460P (78% identity) | GCSGC | Pba1060ORF680P |
| 680 | M | M.Hpa1471ORF3275P (87% identity) | GCSGC | M.Pba1060ORF680P |
| 681 | 87 aa hypothetical protein | |||
| 1315 | 3-dehydroquinate synthase | |||
| 1316 | M | M.RheG1III (95% identity) | GATC | M.Pba1060ORF1316P |
| 1317 | 109 aa hypothetical protein | |||
| 1566 | 56 aa hypothetical protein | |||
| 1567 | M | M.AplK17ORF5100P (58% identity) | M.Pba1060ORF1567P | |
| 1568 | 224 aa hypothetical protein | |||
| 1592 | Phage NinB DNA recombination | |||
| 1593 | M | M.ApasMORFRP (70% identity) | GATC | M.Pba1060ORF1593P |
| 1594 | Replication protein P | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2210 | 63 aa hypothetical protein | |||
| ??? | R | RheG1ORF2485P (99% identity) | Pba1060ORF2213P | |
| 2213 | M | M.RheG1ORF2485P (100% identity) | M.Pba1060ORF2213P | |
| 2214 | 85 aa hypothetical protein | |||