Micromonospora rifamycinica DSM 44983 |
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Putative Micromonospora rifamycinica DSM 44983 RM systems
Ref: Varghese,Neha. and Submissions,Spin unpublished
REBASE ref # 22454
Complete sequence: 7,011,369 bp
GenBank #: LT607752
REBASE acronym: Mri44983
Org_num: 20249
All begin GA0070623_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2753 | 224 aa hypothetical protein | |||
| 2754 | M | M.MspD714ORF12430P (96% identity) | M.Mri44983ORF2754P | |
| 2755 | S | S.MspD714ORF12430P (95% identity) | S.Mri44983ORF2754P | |
| 2756 | 445 aa hypothetical protein | |||
| 2759 | AIPR protein | |||
| 2760 | R | Mri1ORF16545P (98% identity) | Mri44983ORF2760P | |
| 2761 | Serine/threonine protein kinase | |||
| 3465 | PIN domain-containing protein | |||
| 3466 | R | Mri1ORF12905P (96% identity) | Mri44983ORF3468P | |
| 3467 | S | S.Msp92ORF630P (49% identity) | S.Mri44983ORF3468P | |
| 3468 | M | M.Msp421ORF23325P (92% identity) | M.Mri44983ORF3468P | |
| 3469 | Transcriptional regulator, contains XRE-family | |||
| 5508 | 144 aa hypothetical protein | |||
| 5509 | R | Msp421ORF2435P (92% identity) | Mri44983ORF5511P | |
| 5510 | S | S.Msp39ORF2365P (50% identity) | S.Mri44983ORF5511P | |
| 5511 | M | M.Msp421ORF2435P (98% identity) | M.Mri44983ORF5511P | |
| 5512 | Helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2470 | 502 aa hypothetical protein | |||
| 2471 | M | M.MspD987ORF7230P (98% identity) | GTCGAC | M.Mri44983ORF2471P |
| 2472 | RNA polymerase nonessential primary-like sigma | |||
| 2476 | SNF2 family N-terminal domain-containing | |||
| 2477 | RM | Mri1ORF18340P (90% identity) | Mri44983ORF2477P | |
| 3218 | 98 aa hypothetical protein | |||
| 3219 | R | McaJXNU1ORF4140P (73% identity) | CTCGAG | Mri44983ORF3220P |
| 3220 | M | M.McaJXNU1ORF4140P (80% identity) | CTCGAG | M.Mri44983ORF3220P |
| 3221 | regulatory protein, gntR family | |||
| 3312 | von Hippel-Lindau disease tumour suppressor | |||
| 3313 | M | M.MspD987ORF3135P (97% identity) | M.Mri44983ORF3313P | |
| 3314 | 65 aa hypothetical protein | |||
| 5277 | 35 aa hypothetical protein | |||
| 5278 | M | M.MspD714ORF29595P (97% identity) | AGGCCT | M.Mri44983ORF5278P |
| 5279 | R | MspD714ORF29595P (99% identity) | AGGCCT | Mri44983ORF5278P |
| 5280 | 288 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1550 | carbohydrate ABC transporter substrate-binding | |||
| 1551 | R | MspD714McrCP (87% identity) | Mri44983McrCP | |
| 1552 | R | MspD714McrBP (98% identity) | Mri44983McrBP | |
| 1553 | 107 aa hypothetical protein | |||