Salmonella enterica subsp. enterica serovar Typhimurium NC983 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium NC983 RM systems
Ref: Troxell,B. et al. unpublished
REBASE ref # 22899
| Sequence length: | GenBank #: | |
| Chromosome: | 4,846,304 bp | CP015157 |
| plasmid unnamed: | 93,829 bp | CP015158 |
REBASE acronym: Sen983
Org_num: 19912
All begin A4H32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23075 | 110 aa hypothetical protein | |||
| 23080 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen983ORF23085P |
| 23085 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen983ORF23085P |
| 23090 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen983ORF23085P |
| 23095 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6225 | 221 aa hypothetical protein | |||
| 6230 | M | M.Sens29958ORF6205P (100% identity) | M.Sen983ORF6230P | |
| 6235 | 217 aa hypothetical protein | |||
| 10210 | drug/metabolite exporter YedA | |||
| 10215 | V | V.StyUK1DcmP (100% identity) | V.Sen983DcmP | |
| 10220 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen983DcmP |
| 10225 | phosphohydrolase | |||
| 17355 | Fis family transcriptional regulator | |||
| 17360 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen983ORF17360P |
| 17365 | DUF2556 domain-containing protein | |||
| 17850 | ribulose-phosphate 3-epimerase | |||
| 17855 | M | M.StyTDamP (100% identity) | GATC | M.Sen983DamP |
| 17860 | cell division protein DamX | |||
| 22915 | 363 aa hypothetical protein | |||
| 22920 | RM | StyUK1IV (100% identity) | GATCAG | Sen983ORF22920P |
| 22925 | DNA repair protein | |||
| plasmid unnamed | ||||
| 23760 | 62 aa hypothetical protein | |||
| 23765 | M | M.StyUK1ORFAP (100% identity) | M.Sen983ORF23765P | |
| 23770 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | sugar transporter | |||
| 1825 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen983ORF1825P |
| 1830 | R | StyUK1IP (99% identity) | CAGAG | Sen983ORF1825P |
| 1835 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23090 | type I restriction-modification system | |||
| 23095 | R | StyUK1MrrP (100% identity) | Sen983MrrP | |
| 23100 | 95 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10435 | crossover junction endodeoxyribonuclease | |||
| 10440 | M | M.StyUK1V (100% identity) | GATC | M.Sen983ORF10440P |
| 10445 | 160 aa hypothetical protein | |||