Fibrobacter succinogenes S85 (DOE) |
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Putative Fibrobacter succinogenes S85 (DOE) RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 11302
Complete sequence: 3,842,635 bp
GenBank #: CP001792 (NC_013410)
REBASE acronym: Fsu85
Org_num: 5595
All begin Fisuc_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1344 | 171 aa hypothetical protein | |||
| 1345 | S | S.FssORF1812P (100% identity) | S.Fsu85ORF1346P | |
| 1346 | M | M.FssORF1812P (100% identity) | M.Fsu85ORF1346P | |
| 1347 | R | FssORF1812P (100% identity) | Fsu85ORF1346P | |
| 1348 | Virulence protein-like protein | |||
| 1719 | protein of unknown function DUF1016 | |||
| 1720 | R | FssORF2218P (100% identity) | Fsu85ORF1722P | |
| 1721 | S | S.FssORF2218P (100% identity) | S.Fsu85ORF1722P | |
| 1722 | M | M.FssORF2218P (100% identity) | M.Fsu85ORF1722P | |
| 1723 | transcriptional regulator, LysR family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 68 | 3-isopropylmalate dehydratase, small subunit | |||
| 69 | M | M.FssORF468P (100% identity) | GACGTC | M.Fsu85ORF69P |
| 70 | 211 aa hypothetical protein | |||
| 71 | C | transcriptional regulator, XRE family | C.Fsu85ORF69P | |
| 72 | ErfK/YbiS/YcfS/YnhG family protein | |||
| 698 | transcriptional regulator | |||
| 699 | RM | FssORF1135P (100% identity) | Fsu85ORF699P | |
| 700 | valyl-tRNA synthetase | |||
| 929 | 153 aa hypothetical protein | |||
| 930 | M | M.FssI (100% identity) | GGWCC | M.Fsu85ORF930P |
| 931 | 273 aa hypothetical protein | |||
| 932 | R | FssI (100% identity) | GGWCC | Fsu85ORF930P |
| 933 | C | transcriptional regulator, XRE family | C.Fsu85ORF930P | |
| 934 | 104 aa hypothetical protein | |||
| 1363 | 620 aa hypothetical protein | |||
| 1364 | R | FssORF1831P (100% identity) | Fsu85ORF1364P | |
| 1365 | 230 aa hypothetical protein | |||
| 2447 | transcriptional regulator, XRE family | |||
| 2448 | RM | FssORF3012P (100% identity) | Fsu85ORF2448P | |
| 2449 | DEAD-like helicase | |||
| 2877 | pyruvate ferredoxin/flavodoxin oxidoreductase | |||
| 2878 | M | M.FssORF136P (100% identity) | CTGCAG | M.Fsu85ORF2878P |
| 2879 | R | FssORF136P (100% identity) | CTGCAG | Fsu85ORF2878P |
| 2880 | 229 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 261 | 66 aa hypothetical protein | |||
| 262 | R | FssORF674P (100% identity) | Fsu85ORF263P | |
| 263 | M | M.FssORF674P (93% identity) | M.Fsu85ORF263P | |
| 264 | KilA, N-terminal/APSES-type HTH DNA-binding | |||
| 1288 | 351 aa conserved hypothetical protein | |||
| 1289 | R | FssORF1757P (100% identity) | Fsu85ORF1289P | |
| 1290 | 75 aa hypothetical protein | |||
| 1297 | DNA primase small subunit | |||
| 1298 | M | M.FssORF1765P (100% identity) | M.Fsu85ORF1298P | |
| 1299 | 898 aa hypothetical protein | |||
| 1826 | 328 aa hypothetical protein | |||
| 1827 | M | M.FssORF2331P (100% identity) | M.Fsu85ORF1827P | |
| 1828 | R | type III restriction protein res subunit | Fsu85ORF1827P | |
| 1829 | cell divisionFtsK/SpoIIIE | |||
| 2499 | 119 aa conserved hypothetical protein | |||
| 2500 | M | M.FssORF3068P (100% identity) | M.Fsu85ORF2500P | |
| 2501 | R | FssORF3068P (100% identity) | Fsu85ORF2500P | |
| 2502 | 4Fe-4S ferredoxin iron-sulfur binding domain | |||