Bacteroides thetaiotaomicron VPI-5482 |
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Putative Bacteroides thetaiotaomicron VPI-5482 RM systems
Ref: Xu,J. et al. Science 299 (5615), 2074-2076 (2003)
REBASE ref # 8007
Complete sequence: 6,260,361 bp
GenBank #: AE015928 (NC_004663)
REBASE acronym: BthV
Org_num: 3715
All begin BT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4516 | 579 aa conserved hypothetical protein | |||
| 4517 | R | Msa17ORFY1P (100% identity) | BthVORF4518P | |
| 4518 | M | M.Msa17ORFY1P (100% identity) | M.BthVORF4518P | |
| 4519 | S | S1.BthI5482ORF11910P (100% identity) | CCAYNNNNNNRTTT | S1.BthVORF4518P |
| 4520 | S | S1.Msa17ORFY1P (100% identity) | S2.BthVORF4518P | |
| 4521 | integrase | |||
| 4522 | S | S3.BthI5482ORF11910P (100% identity) | S3.BthVORF4518P | |
| 4523 | S | S3.Msa17ORFY1P (100% identity) | S4.BthVORF4518P | |
| 4524 | 96 aa conserved hypothetical protein | |||
| 4534 | 94 aa hypothetical protein | |||
| 4535 | R | Msa17ORFB2P (100% identity) | BthVORF4538P | |
| 4536 | 307 aa conserved hypothetical protein | |||
| 4537 | 567 aa conserved hypothetical protein | |||
| 4538 | M | M.Msa17ORFB2P (100% identity) | M.BthVORF4538P | |
| 4539 | 462 aa conserved hypothetical protein | |||
| 4540 | S | S1.Msa17ORFB2P (99% identity) | S.BthVORF4538AP | |
| 4541 | S | S2.Msa17ORFB2P (100% identity) | S.BthVORF4538BP | |
| 4542 | S | S3.Msa17ORFB2P (100% identity) | S.BthVORF4538CP | |
| 4543 | S | S4.Msa17ORFB2P (100% identity) | S.BthVORF4538DP | |
| 4544 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1930 | possible DNA-binding protein | |||
| 1931 | RM | Msa17ORFE1P (97% identity) | BthVORF1931P | |
| 1932 | transposase | |||
| 2354 | 725 aa conserved hypothetical protein | |||
| 2355 | M | M.Msa17ORFTP (100% identity) | M.BthVORF2355P | |
| 2356 | transcriptional regulator, AraC family | |||
| 4010 | 462 aa conserved hypothetical protein | |||
| 4011 | M | M.Pvu626ORF9540P (100% identity) | M.BthVORF4011P | |
| 4012 | ABC oligo/dipeptide transport, | |||
| 4012 | ABC oligo/dipeptide transport, | |||
| ??? | RM | BthI5482ORF9380P (78% identity) | BthVORF4013P | |
| 4015 | transposase | |||
| 4625 | DNA modification methylase BstVI | |||
| 4626 | RM | Msa17ORFE2P (26% identity) | BthVORF4626P | |
| 4627 | DNA modification methylase | |||
| 4626 | 265 aa conserved hypothetical protein | |||
| 4627 | RM | Pvu191ORF4115P (100% identity) | BthVORF4627P | |
| 4628 | ATP-dependent helicase | |||
| 4753 | Lambda repressor-like, DNA-binding protein | |||
| 4754 | M | M.Msa17ORFGP (100% identity) | M.BthVORF4754P | |
| 4755 | two-component system sensor histidine | |||