Vibrio parahaemolyticus CHN25 |
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Putative Vibrio parahaemolyticus CHN25 RM systems
Ref: Zhu,C. et al. unpublished
REBASE ref # 22390
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,416,467 bp | CP010883 |
| plasmid P1: | 92,495 bp | CP010885 |
REBASE acronym: VpaCHN25
Org_num: 19841
All begin VpaChn25_, VpaChn25_PA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 594 | inner membrane protein | |||
| ??? | S | S.ScoM318ORF2010P (96% identity) | S.VpaCHN25ORF595P | |
| 595 | M | M.VspJ16ORF281P (100% identity) | M.VpaCHN25ORF595P | |
| 596 | Na+-driven multidrug efflux pump | |||
| 597 | 428 aa hypothetical protein | |||
| 598 | R | VphVPD14ORF14435P (99% identity) | VpaCHN25ORF595P | |
| 599 | 806 aa hypothetical protein | |||
| 2350 | restriction endonuclease | |||
| ??? | R | Val1833aORFAP (99% identity) | VpaCHN25ORF2353P | |
| 2352 | S | S.VspJ16AORF1323P (100% identity) | S.VpaCHN25ORF2353P | |
| 2353 | M | M.Val1833aORFAP (100% identity) | M.VpaCHN25ORF2353P | |
| 2354 | 316 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2669 | ribulose-phosphate 3-epimerase | |||
| 2670 | M | M.VphVPD14DamP (100% identity) | GATC | M.VpaCHN25DamP |
| 2671 | DamX-like protein | |||
| plasmid P1 | ||||
| 2 | 165 aa Hypothetical protein | |||
| 3 | M | M.VpaV493ORF1P (99% identity) | CCNGG | M.VpaCHN25ORF3P |
| 23 | 67 aa hypothetical protein | |||
| 24 | R | Vta4600ORF3622P (99% identity) | CTGCAG | VpaCHN25ORF25P |
| 25 | M | M.Vta4600ORF3622P (99% identity) | CTGCAG | M.VpaCHN25ORF25P |
| 26 | transposase OrfAB subunit B | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2349 | 59 aa hypothetical protein | |||
| 2350 | R | Val1833aMrrP (100% identity) | VpaCHN25MrrP | |
| 2351 | HsdR family type I site-specific | |||