Escherichia coli 2014C-3250 |
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Putative Escherichia coli 2014C-3250 RM systems
Ref: Lindsey,R.L. et al. unpublished
REBASE ref # 22207
Contig set: 5,351,795 bp
GenBank #: LXPH00000000 (NZ_LXPH00000000)
REBASE acronym: Eco3250
Org_num: 20396
All begin A5959_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18100 | 428 aa hypothetical protein | |||
| 18105 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco3250I |
| 18110 | M | M.EcohubtORF19935P (100% identity) | TGANNNNNNTCCA | M.Eco3250I |
| 18115 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 110 | phosphohydrolase | |||
| 115 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco3250Dcm |
| 120 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco3250DcmP |
| 125 | drug/metabolite exporter YedA | |||
| 18835 | 648 aa hypothetical protein | |||
| 18845 | M | M.EcoTWORF1742P (100% identity) | M.Eco3250ORF18845P | |
| 18850 | TrmB family transcriptional regulator | |||
| 21845 | endonuclease | |||
| 21850 | M | M.EcosBORF4330P (100% identity) | GATC | M.Eco3250ORF21850P |
| 21855 | 75 aa hypothetical protein | |||
| 23525 | protein ninF | |||
| 23530 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco3250ORF23530P |
| 23535 | 146 aa hypothetical protein | |||
| 23620 | cruciferin | |||
| 23625 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco3250ORF23625P |
| 23630 | 27 aa hypothetical protein | |||
| 5570 | protein ninE | |||
| 5575 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco3250ORF5575P |
| 5580 | 146 aa hypothetical protein | |||
| 12235 | Fis family transcriptional regulator | |||
| 12240 | M | M.Ecod6c8ORFAP (100% identity) | ATGCAT | M.Eco3250ORF12240P |
| 12245 | 59 aa hypothetical protein | |||
| 12810 | ribulose-phosphate 3-epimerase | |||
| 12815 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3250DamP |
| 12820 | cell division protein DamX | |||
| 16605 | 330 aa hypothetical protein | |||
| 16610 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco3250ORF16610P |
| 16615 | LexA family transcriptional regulator | |||
| 18580 | 162 aa hypothetical protein | |||
| 18585 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.Eco3250ORF18585P |
| 18590 | LexA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18115 | 128 aa hypothetical protein | |||
| 18120 | R | EcohubtMcrCP (100% identity) | Eco3250McrCP | |
| 18125 | R | Eco780McrBP (100% identity) | Eco3250McrBP | |
| 18130 | restriction endonuclease | |||