Escherichia coli 2011C-3198 |
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Putative Escherichia coli 2011C-3198 RM systems
Ref: Lindsey,R.L. et al. unpublished
REBASE ref # 22207
Contig set: 5,292,264 bp
GenBank #: LXPF00000000 (NZ_LXPF00000000)
REBASE acronym: Eco3198
Org_num: 20394
All begin A5957_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20355 | 428 aa hypothetical protein | |||
| 20360 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco3198I |
| 20365 | M | M.EcohubtORF19935P (100% identity) | TGANNNNNNTCCA | M.Eco3198I |
| 20370 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 100 | protein TolA | |||
| 115 | M | M.EcoS19141ORF4605P (90% identity) | M.Eco3198ORF115P | |
| 120 | TrmB family transcriptional regulator | |||
| 8975 | 65 aa hypothetical protein | |||
| 8980 | M | M.EcoSCU152ORF7280P (100% identity) | M.Eco3198ORF8980P | |
| 8985 | flagella biosynthesis regulator | |||
| 8705 | 73 aa hypothetical protein | |||
| 8710 | M | M.EcoS19141ORF25065P (100% identity) | M.Eco3198ORF8710P | |
| 8715 | 101 aa hypothetical protein | |||
| 1005 | Shiga toxin subunit A | |||
| 1025 | M | M.EcoBU10ORF705P (99% identity) | M.Eco3198ORF1025P | |
| 1030 | TrmB family transcriptional regulator | |||
| 5620 | drug/metabolite exporter YedA | |||
| 5625 | V | V.SsoSE61DcmP (100% identity) | V.Eco3198DcmP | |
| 5630 | M | M.EcoS19141DcmP (100% identity) | CCWGG | M.Eco3198Dcm |
| 5635 | phosphohydrolase | |||
| 6325 | phage portal protein | |||
| 6330 | M | M.EcoS19141ORF25P (90% identity) | GRGCYC | M.Eco3198ORF6330P |
| ??? | C | C.Ecostr10ORF20P (100% identity) | C.Eco3198ORF6330P | |
| 6335 | R | EcoS19141ORF25P (100% identity) | GRGCYC | Eco3198ORF6330P |
| 6340 | replication protein A | |||
| 6825 | LexA family transcriptional regulator | |||
| 6830 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco3198ORF6830P |
| 6835 | 162 aa hypothetical protein | |||
| 13845 | Fis family transcriptional regulator | |||
| 13850 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco3198ORF13850P |
| 13855 | 59 aa hypothetical protein | |||
| 14415 | ribulose-phosphate 3-epimerase | |||
| 14420 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3198DamP |
| 14425 | cell division protein DamX | |||
| 23940 | 162 aa hypothetical protein | |||
| 23945 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco3198ORF23945P |
| 23950 | LexA family transcriptional regulator | |||
| 26440 | TrmB family transcriptional regulator | |||
| 26445 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco3198ORF26445P | |
| 26465 | Shiga toxin subunit A | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20370 | 128 aa hypothetical protein | |||
| 20375 | R | EcohubtMcrCP (100% identity) | Eco3198McrCP | |
| 20380 | R | SflN101McrBP (100% identity) | Eco3198McrBP | |
| 20385 | restriction endonuclease | |||