Dehalogenimonas alkenigignens IP3-3 |
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Putative Dehalogenimonas alkenigignens IP3-3 RM systems
Ref: Key,T.A. et al. Stand Genomic Sci 11, 44 (2016)
REBASE ref # 22126
Contig set: 1,849,792 bp
GenBank #: LFDV00000000 (NZ_LFDV00000000)
REBASE acronym: DalIP33
Org_num: 20311
All begin DEALK_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 470 | transcriptional regulator, AlpA family | |||
| 480 | M | M.GprBW2ORF800P (71% identity) | M.DalIP33ORF480P | |
| 490 | S | M.GprBW2ORF800P (15% identity) | S.DalIP33ORF480P | |
| 500 | Protein of unknown function (DUF3644) | |||
| 510 | R | Msp374BORF21245P (74% identity) | DalIP33ORF480P | |
| 520 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2210 | 63 aa hypothetical protein | |||
| 2220 | RM | DspNSZ14ORF485P (100% identity) | DalIP33ORF2220P | |
| 2230 | 155 aa hypothetical protein | |||
| 6530 | PLD-like domain | |||
| 6540 | RM | Cba153FORF15360P (52% identity) | DalIP33ORF6540P | |
| 6550 | 574 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18130 | 151 aa hypothetical protein | |||
| 18140 | R | DmcWBC2ORF81P (83% identity) | DalIP33ORF18150P | |
| 18150 | M | M.PbaINEORF1510P (38% identity) | M.DalIP33ORF18150P | |
| 18160 | protein of unknown function (DUF4391) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 520 | metal-dependent hydrolase | |||
| 530 | R | Pac3247MrrP (85% identity) | DalIP33MrrP | |
| 540 | UvrD-like helicase C-terminal domain/UvrD/REP | |||