Atopobium parvulum DSM 20469 |
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Putative Atopobium parvulum DSM 20469 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14140
Complete sequence: 1,543,805 bp
GenBank #: CP001721 (NC_013203)
REBASE acronym: ApaHS
Org_num: 5548
All begin Apar_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 194 | 187 aa hypothetical protein | |||
| 195 | S | S1.Mfo14469aORF10135P (31% identity) | S1.ApaHSORF199P | |
| 196 | integrase family protein | |||
| 197 | R | Eba1050ORF5030P (63% identity) | ApaHSORF199P | |
| 198 | S | S1.Ema25476ORFCP (47% identity) | S2.ApaHSORF199P | |
| 199 | M | M.Bad2019ORFBP (67% identity) | M.ApaHSORF199P | |
| 200 | 195 aa hypothetical protein | |||
| 1223 | plasmid maintenance system antidote protein, XRE | |||
| 1224 | M | M.PmeBin220ORFDP (74% identity) | AYCNNNNNCTTC | M.ApaHSI |
| 1225 | S | S.PmeBin220ORFDP (71% identity) | AYCNNNNNCTTC | S.ApaHSI |
| 1226 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 175 | 97 aa conserved hypothetical protein | |||
| 176 | RM | McuHORF10445P (55% identity) | ApaHSORF176P | |
| 177 | 657 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1212 | 142 aa hypothetical protein | |||
| 1213 | R | OspGAM18McrCP (83% identity) | ApaHSMcrCP | |
| 1214 | R | OspGAM18McrBP (85% identity) | ApaHSMcrBP | |
| 1215 | 415 aa hypothetical protein | |||