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Putative Xylella fastidiosa 9a5c RM systems
Ref: Simpson,A.J.G. et al. Nature 406 (6792), 151-157 (2000)
REBASE ref # 6356
Complete sequence: 2,679,306 bp
GenBank #: AE003849 (NC_002488)
REBASE acronym: Xfa
Org_num: 3085
All begin XF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
294 | 114 aa hypothetical protein | |||
??? | R | Xfa24ORF1275P (95% identity) | XfaORF297P | |
296 | S | S.XfaXf6cORF1300P (100% identity) | S.XfaORF297P | |
297 | M | M.Xfa24ORF1275P (100% identity) | M.XfaORF297P | |
298 | 93 aa hypothetical protein | |||
2720 | 81 aa hypothetical protein | |||
2721 | R | Xfa24ORF11830P (100% identity) | XfaORF2723P | |
2722 | S | S.Xfa24ORF11830P (100% identity) | S.XfaORF2723P | |
??? | M | M.Xfa24ORF11830P (100% identity) | M.XfaORF2723P | |
2725 | type I restriction-modification system | |||
??? | N-6 DNA methylase | |||
2725 | R | Xfa24ORF11855P (100% identity) | XfaORF2728P | |
2726 | S | S.Xfa24ORF11855P (100% identity) | S.XfaORF2728P | |
2727 | 56 aa hypothetical protein | |||
2728 | M | M.Xfa24ORF11855P (100% identity) | M.XfaORF2728P | |
2729 | 79 aa hypothetical protein | |||
2738 | 139 aa hypothetical protein | |||
2739 | R | Xfa24ORF11915P (100% identity) | XfaORF2742P | |
2740 | 210 aa hypothetical protein | |||
2741 | S | S.Xfa24ORF11915P (100% identity) | S.XfaORF2742P | |
2742 | M | M.Xfa24ORF11915P (100% identity) | M.XfaORF2742P | |
2743 | 55 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
639 | 68 aa hypothetical protein | |||
640 | R | Xfa24ORF2680P (100% identity) | CGTACG | XfaORF641P |
641 | M | M.XfaXf32ORF2530P (100% identity) | CGTACG | M.XfaORF641P |
642 | 61 aa hypothetical protein | |||
934 | 83 aa hypothetical protein | |||
935 | M | M.XfaXf6cORF10320P (100% identity) | M.XfaORF935P | |
936 | 376 aa hypothetical protein | |||
1773 | 252 aa hypothetical protein | |||
1774 | M | M.XfaAM2ORF5060P (78% identity) | M.XfaORF1774P | |
1776 | DNA topoisomerase III | |||
1803 | 190 aa hypothetical protein | |||
1804 | M | M.XfaXf6cORF5915P (100% identity) | GCATGC | M.XfaORF1804P |
1805 | 56 aa hypothetical protein | |||
2296 | 53 aa hypothetical protein | |||
2297 | M | DNA methylase | M.XfaORF2297P | |
2298 | low molecular weight phosphotyrosine protein | |||
2312 | 53 aa hypothetical protein | |||
2313 | M | M.Xfa3124ORF3280P (100% identity) | M.XfaORF2313P | |
2314 | phage-related lysozyme | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1965 | haloalkane dehalogenase | |||
1966 | R | Xfa24ORF8535P (100% identity) | XfaORF1968P | |
1967 | 72 aa hypothetical protein | |||
1968 | M | M.Xfa24ORF8535P (100% identity) | M.XfaORF1968P | |
1969 | 52 aa hypothetical protein |