Neisseria meningitidis M23413 |
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Putative Neisseria meningitidis M23413 RM systems
Ref: Retchless,A.C. et al. unpublished
REBASE ref # 22538
Complete sequence: 2,173,723 bp
GenBank #: CP016662
REBASE acronym: Nme23413
Org_num: 20158
All begin A6L52_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 430 | ADP-glyceromanno-heptose 6-epimerase | |||
| 435 | R | NmeS4ORFEP (98% identity) | CCAGA | Nme23413ORF440P |
| 440 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme23413ORF440P |
| 445 | 323 aa hypothetical protein | |||
| 915 | phenylalanine--tRNA ligase subunit beta | |||
| 920 | R | Nme961ORF1427P (100% identity) | RCCGGY | Nme23413ORF920P |
| 925 | M | M.Nme961ORF1427P (100% identity) | RCCGGB | M.Nme23413ORF920P |
| 930 | V | V.NmeS4ORFGP (100% identity) | RCCGGY | V.Nme23413ORF920P |
| 935 | phenylalanine--tRNA ligase subunit alpha | |||
| 2780 | 184 aa hypothetical protein | |||
| 2785 | M | M2.NmeS4ORFAP (100% identity) | GATC | M1.Nme23413ORF2785P |
| 2790 | M | M1.NmeS4ORFAP (99% identity) | GATC | M2.Nme23413ORF2785P |
| 2795 | leucine--tRNA ligase | |||
| 2950 | 123 aa hypothetical protein | |||
| 2955 | R | R2.NmeS4ORFBP (100% identity) | CCTTC | Nme23413ORF2970BP |
| 2960 | transposase | |||
| 2965 | R | NmeM395ORFBAP (100% identity) | CCTTC | Nme23413ORF2970AP |
| ??? | M | M.NmeM395I (100% identity) | CCTTC | M.Nme23413ORF2970P |
| 2975 | 61 aa hypothetical protein | |||
| 4160 | UDP-glucose 4-epimerase GalE | |||
| ??? | M | DNA -methyltransferase | GGTGA | M.Nme23413ORF4165P |
| 4175 | RNA-binding transcriptional accessory protein | |||
| 5415 | 48 aa hypothetical protein | |||
| 5420 | M | M.NmeS4ORFFP (100% identity) | CCGG | M.Nme23413ORF5420P |
| 5425 | R | NmeS4ORFFP (100% identity) | CCGG | Nme23413ORF5420P |
| 5430 | V | V.NmeS4ORFFP (100% identity) | V.Nme23413ORF5420P | |
| 5435 | ATP-dependent helicase | |||
| 7825 | transposase | |||
| 7830 | M | DNA (cytosine-5-)-methyltransferase | GCGCGC | M.Nme23413ORF7830P |
| 7835 | R | restriction endonuclease | GCGCGC | Nme23413ORF7830P |
| 7840 | alanine--tRNA ligase | |||
| 9605 | 3-isopropylmalate dehydrogenase | |||
| ??? | R | NmeMBH1ORFHP (100% identity) | GGNNCC | Nme23413ORF9620P |
| 9620 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Nme23413ORF9620P |
| 9625 | 3-isopropylmalate dehydratase small subunit | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8980 | alpha-hydroxy-acid oxidizing enzyme | |||
| 8985 | R | NmeS4ORFDP (100% identity) | ACACC | Nme23413ORF8990P |
| ??? | M | M.Nme7149ORF345P (100% identity) | ACACC | M.Nme23413ORF8990P |
| 9000 | tRNA pseudouridine(55) synthase TruB | |||
| 9550 | peptidylprolyl isomerase | |||
| ??? | M | M.NmeM395ORFLP (100% identity) | M.Nme23413ORF9555P | |
| 9560 | R | NmeS4ORFIP (100% identity) | Nme23413ORF9555P | |
| 9565 | tRNA 2-thiocytidine(32) synthetase TtcA | |||