Burkholderia pseudomallei M1 |
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Putative Burkholderia pseudomallei M1 RM systems
Ref: Vadivelu,J. unpublished
REBASE ref # 16812
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,061,776 bp | CP016638 |
| chromosome 2: | 3,256,300 bp | CP016639 |
REBASE acronym: BpsM1
Org_num: 20113
All begin A7U58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 15215 | phenylacetic acid degradation protein | |||
| ??? | R | BpsMSIVP (100% identity) | CAYNNNNNNNCTCC | BpsM1IVP |
| ??? | M | M.BpsMSIV (100% identity) | CAYNNNNNNNCTCC | M.BpsM1IV |
| ??? | S | S.BpsMSIV (100% identity) | CAYNNNNNNNCTCC | S.BpsM1IV |
| 15235 | 83 aa hypothetical protein | |||
| 15285 | 404 aa hypothetical protein | |||
| ??? | S | S.BpsMSIII (100% identity) | CCANNNNNNNNRTGCC | S.BpsM1III |
| 15295 | M | M.BpsMSIII (100% identity) | CCANNNNNNNNRTGCC | M.BpsM1III |
| 15300 | R | BpsMSIIIP (100% identity) | CCANNNNNNNNRTGCC | BpsM1IIIP |
| 15305 | 880 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 820 | glycosyl transferase family 25 | |||
| 825 | M | M.BspBDU8ORF14540P (100% identity) | M.BpsM1ORF825P | |
| 830 | 173 aa hypothetical protein | |||
| 17580 | baseplate assembly protein | |||
| ??? | M | M.BpsMSORF17545P (100% identity) | M.BpsM1ORF17585P | |
| 17595 | integrase | |||
| chromosome 2 | ||||
| 18840 | transposase | |||
| ??? | V | V.BpsMSORFAP (100% identity) | V.BpsM1ORFAP | |
| 18845 | transposase | |||
| 18850 | transposase | |||
| ??? | C | C.BpsMSORFAP (100% identity) | C.BpsM1ORFAP | |
| ??? | M | M.BpsMSORFAP (100% identity) | M.BpsM1ORFAP | |
| ??? | R | PpnRB38ORF11825P (100% identity) | BpsM1ORFAP | |
| 18860 | 411 aa hypothetical protein | |||
| 24875 | tryptophan synthase subunit beta | |||
| 24880 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.BpsM1II |
| 24885 | tryptophan synthase subunit alpha | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 15690 | 102 aa hypothetical protein | |||
| 15695 | R | BpsMSIP (100% identity) | CACAG | BpsM1IP |
| 15700 | M | M.BpsW107ORF1669P (99% identity) | CACAG | M.BpsM1I |
| 15705 | porin | |||