Escherichia coli O157:H7 FRIK944 |
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Putative Escherichia coli O157:H7 FRIK944 RM systems
Ref: Kasper,C. et al. unpublished
REBASE ref # 22537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,770,602 bp | CP016625 |
| plasmid p0157: | 95,598 bp | CP016626 |
REBASE acronym: Eco944
Org_num: 20133
All begin A9L45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29380 | 113 aa hypothetical protein | |||
| 29385 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco944ORF29390P |
| 29390 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco944ORF29390P |
| 29395 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco944ORF29390P |
| 29400 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1635 | 162 aa hypothetical protein | |||
| 1640 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco944ORF1640P |
| 1645 | LexA family transcriptional regulator | |||
| 9635 | TrmB family transcriptional regulator | |||
| 9640 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco944ORF9640P | |
| 9655 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 11325 | 648 aa hypothetical protein | |||
| 11330 | M | M.EcoTWORF1742P (100% identity) | M.Eco944ORF11330P | |
| 11335 | TrmB family transcriptional regulator | |||
| 14535 | drug/metabolite exporter YedA | |||
| 14540 | V | V.EcosPA8DcmP (100% identity) | V.Eco944DcmP | |
| 14545 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco944DcmP |
| 14550 | phosphohydrolase | |||
| 15410 | protein ninE | |||
| 15415 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco944ORF15415P |
| 15420 | ninB protein | |||
| 16590 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 16595 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco944ORF16595P | |
| 16600 | TrmB family transcriptional regulator | |||
| 16960 | antirepressor | |||
| 16965 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco944ORF16965P |
| 16970 | ninB protein | |||
| 23060 | Fis family transcriptional regulator | |||
| 23065 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco944ORF23065P |
| 23070 | DUF2556 domain-containing protein | |||
| 23595 | ribulose-phosphate 3-epimerase | |||
| 23600 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco944DamP |
| 23605 | cell division protein DamX | |||
| 27780 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco944ORF27785P | |
| 27795 | Eae protein | |||
| 28995 | integrase | |||
| 29000 | C | C.EcoZ1836ORF24740P (100% identity) | C.Eco944ORF29010P | |
| ??? | R | EcoS3ORF17765P (100% identity) | RGGNCCY | Eco944ORF29010P |
| 29010 | M | M.EcoZ1836ORF24740P (96% identity) | RGGNCCY | M.Eco944ORF29010P |
| 29015 | Polarity suppression protein | |||
| 29110 | helicase | |||
| 29115 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco944ORF29115P |
| 29630 | 162 aa hypothetical protein | |||
| 29635 | M | M.EcoDEC8AORF5999P (100% identity) | GATC | M.Eco944ORF29635P |
| 29640 | LexA family transcriptional regulator | |||
| plasmid p0157 | ||||
| 29980 | 101 aa hypothetical protein | |||
| 29985 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco944ORF29985P | |
| 29990 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29370 | 293 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco944GmrDP | |
| 29380 | 113 aa hypothetical protein | |||