Escherichia coli O177:H21 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O177:H21 RM systems
Ref: Terveer,E.M. unpublished
REBASE ref # 22508
| Sequence length: | GenBank #: | |
| Chromosome: | 5,134,536 bp | CP016546 |
| plasmid unnamed2: | 90,835 bp | CP016548 |
| plasmid unnamed3: | 126,046 bp | CP016549 |
REBASE acronym: Eco177
Org_num: 20082
All begin BB405_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8035 | restriction endonuclease | |||
| 8040 | M | M.EmaC12ORF11130P (100% identity) | CGAYNNNNNNNTTC | M.Eco177ORF8040P |
| 8045 | S | S.EcosEC21ORF19195P (100% identity) | CGAYNNNNNNNTTC | S.Eco177ORF8040P |
| 8050 | R | EcosEC21ORF19195P (100% identity) | CGAYNNNNNNNTTC | Eco177ORF8040P |
| 8055 | 112 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 27390 | 3-phosphatase | |||
| 27395 | R | EcoS321ORF25465P (100% identity) | GAANNNNNNNRTCG | Eco177ORF27405P |
| 27400 | S | S.EcoMB50ORF22700P (100% identity) | GAANNNNNNNRTCG | S.Eco177ORF27405P |
| 27405 | M | M.EcoS321ORF25465P (100% identity) | GAANNNNNNNRTCG | M.Eco177ORF27405P |
| 27410 | prevent-host-death family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 180 | transposase | |||
| 185 | R | EcosEC21ORF11865P (94% identity) | Eco177ORF190P | |
| 190 | M | M.EcosEC21ORF11865P (99% identity) | GTCGAC | M.Eco177ORF190P |
| 195 | 140 aa hypothetical protein | |||
| 7705 | holin | |||
| 7710 | M | M.Sso63633ORF22290P (99% identity) | M.Eco177ORF7710P | |
| 7715 | 67 aa hypothetical protein | |||
| 7740 | LexA family transcriptional regulator | |||
| 7745 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco177ORF7745P |
| 7750 | 162 aa hypothetical protein | |||
| 8385 | restriction endonuclease | |||
| 8390 | R | EcosS9ORF2810P (38% identity) | GGTCTC | Eco177ORF8400AP |
| 8395 | transposase | |||
| ??? | R | restriction endonuclease | GGTCTC | Eco177ORF8400BP |
| ??? | R | EcoC721ORF37500BP (100% identity) | GGTCTC | Eco177ORF8400CP |
| 8400 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco177ORF8400P |
| 8405 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Eco177ORF8400P |
| 8410 | transposase | |||
| 10010 | holin | |||
| 10015 | M | M.Sso63633ORF22290P (100% identity) | M.Eco177ORF10015P | |
| 10020 | 67 aa hypothetical protein | |||
| 13915 | cell division protein DamX | |||
| 13920 | M | DNA adenine methylase | GATC | M.Eco177DamP |
| 13925 | ribulose-phosphate 3-epimerase | |||
| 14460 | DUF2556 domain-containing protein | |||
| 14465 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco177ORF14465P |
| 14470 | Fis family transcriptional regulator | |||
| 16580 | transposase | |||
| 16585 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco177ORF16585P |
| 16590 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco177ORF16585P |
| 16595 | IS2 repressor TnpA | |||
| 18550 | 75 aa hypothetical protein | |||
| 18555 | M | M.EcosBORF4330P (100% identity) | GATC | M.Eco177ORF18555P |
| 18560 | endonuclease | |||
| 22460 | 140 aa hypothetical protein | |||
| 22465 | M | M.EcoS51ORF14475P (100% identity) | M.Eco177ORF22465P | |
| 22470 | 60 aa hypothetical protein | |||
| 22855 | phosphohydrolase | |||
| 22860 | M | M.Ecos53DcmP (100% identity) | CCWGG | M.Eco177DcmP |
| 22865 | V | V.Ecos53DcmP (100% identity) | V.Eco177DcmP | |
| 22870 | drug/metabolite exporter YedA | |||
| plasmid unnamed2 | ||||
| 26770 | 308 aa hypothetical protein | |||
| 26775 | M | M.StyR64ORFAP (100% identity) | M.Eco177ORF26775P | |
| 26780 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 27280 | recombination-associated protein RdgC | |||
| 27285 | M | M.Eco06ORF9275P (99% identity) | M.Eco177ORF27285P | |
| 27300 | 63 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8380 | restriction endonuclease | |||
| 8385 | R | EcosS9McrCP (100% identity) | Eco177McrCP | |
| 8390 | restriction endonuclease | |||