Salmonella enterica subsp. enterica serovar Heidelberg SH13-004 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg SH13-004 RM systems
Ref: Labbe,G. et al. unpublished
REBASE ref # 22806
Complete sequence: 4,750,331 bp
GenBank #: CP016586
REBASE acronym: Sen13004
Org_num: 20093
All begin A6V84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22565 | 110 aa hypothetical protein | |||
| 22570 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen13004ORF22575P |
| 22575 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen13004ORF22575P |
| 22580 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen13004ORF22575P |
| 22585 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5255 | 79 aa hypothetical protein | |||
| 5260 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen13004ORF5260P |
| 5265 | exonuclease | |||
| 10325 | drug/metabolite exporter YedA | |||
| 10330 | V | V.StyTDcmP (100% identity) | V.Sen13004DcmP | |
| 10335 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen13004DcmP |
| 10340 | phosphohydrolase | |||
| 17025 | Fis family transcriptional regulator | |||
| 17030 | M | methyltransferase | ATGCAT | M.Sen13004ORF17030P |
| 17035 | DUF2556 domain-containing protein | |||
| 17515 | ribulose-phosphate 3-epimerase | |||
| 17520 | M | DNA adenine methylase | GATC | M.Sen13004DamP |
| 17525 | cell division protein DamX | |||
| 22400 | helicase | |||
| 22405 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen13004ORF22405P |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2145 | sugar transporter | |||
| 2150 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen13004ORF2150P |
| 2155 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen13004ORF2150P |
| 2160 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22580 | type I restriction-modification system | |||
| 22585 | R | StyUK1MrrP (100% identity) | Sen13004MrrP | |
| 22590 | 95 aa hypothetical protein | |||