Salmonella enterica subsp. enterica serovar Heidelberg SH14-009 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg SH14-009 RM systems
Ref: Labbe,G. et al. unpublished
REBASE ref # 22806
| Sequence length: | GenBank #: | |
| Chromosome: | 4,747,526 bp | CP016581 |
| plasmid pSH14-009_99: | 99,473 bp | CP016585 |
REBASE acronym: Sen4009
Org_num: 20092
All begin A6W14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22555 | 110 aa hypothetical protein | |||
| 22560 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4009ORF22565P |
| 22565 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen4009ORF22565P |
| 22570 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4009ORF22565P |
| 22575 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5250 | 79 aa hypothetical protein | |||
| 5255 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen4009ORF5255P |
| 5260 | exonuclease | |||
| 10325 | drug/metabolite exporter YedA | |||
| 10330 | V | V.StyTDcmP (100% identity) | V.Sen4009DcmP | |
| 10335 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen4009DcmP |
| 10340 | phosphohydrolase | |||
| 17020 | Fis family transcriptional regulator | |||
| 17025 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4009ORF17025P |
| 17030 | DUF2556 domain-containing protein | |||
| 17510 | ribulose-phosphate 3-epimerase | |||
| 17515 | M | M.StyTDamP (100% identity) | GATC | M.Sen4009DamP |
| 17520 | cell division protein DamX | |||
| 22390 | helicase | |||
| 22395 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen4009ORF22395P |
| plasmid pSH14-009_99 | ||||
| 23120 | 308 aa hypothetical protein | |||
| 23125 | M | M.SspPIBORF23080P (100% identity) | M.Sen4009ORF23125P | |
| 23130 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2145 | sugar transporter | |||
| 2150 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen4009ORF2150P |
| 2155 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen4009ORF2150P |
| 2160 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22570 | type I restriction-modification system | |||
| 22575 | R | StyUK1MrrP (100% identity) | Sen4009MrrP | |
| 22580 | 95 aa hypothetical protein | |||