Vibrio scophthalmi VS-05 |
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Putative Vibrio scophthalmi VS-05 RM systems
Ref: Han,H.-J. unpublished
REBASE ref # 22477
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,199,837 bp | CP016414 |
| chromosome 2: | 1,467,214 bp | CP016415 |
REBASE acronym: VscVS05
Org_num: 20040
All begin VSVS05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 3157 | 649 aa hypothetical protein | |||
| 3158 | M | M.Vta1625ORF12540P (85% identity) | M.VscVS05ORF3158P | |
| 3159 | S | S.VleF12II (53% identity) | S.VscVS05ORF3158P | |
| 3160 | R | Vcy1618ORF13200P (86% identity) | VscVS05ORF3158P | |
| 3161 | 240 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1876 | ATP-dependent helicase YeeB | |||
| 1877 | RM | Vsp139ORFBP (78% identity) | VscVS05ORF1877P | |
| 1878 | 109 aa hypothetical protein | |||
| 2545 | Ribulose-phosphate 3-epimerase | |||
| 2546 | M | M.VscVS12DamP (100% identity) | GATC | M.VscVS05DamP |
| 2547 | 490 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 514 | Miniconductance mechanosensitive channel YbdG | |||
| 515 | R | Vsp418McrAP (68% identity) | VscVS05ORF515P | |
| 516 | DNA-invertase from lambdoid prophage | |||