Xanthomonas campestris pv. campestris str. ATCC 33913 |
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Putative Xanthomonas campestris pv. campestris str. ATCC 33913 RM systems
Ref: da Silva,A.C.R. et al. Nature 417 (6887), 459-463 (2002)
REBASE ref # 7466
Complete sequence: 5,076,188 bp
GenBank #: AE008922 (NC_003902)
REBASE acronym: XcaC
Org_num: 3470
All begin XCC
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 461 | 121 aa hypothetical protein | |||
| 462 | R | Xcacc2ORF2325P (100% identity) | XcaCORF466P | |
| 463 | S | S.Xcacc2ORF2325P (100% identity) | S.XcaCORF466P | |
| 464 | anticodon nuclease | |||
| 465 | DNA-binding protein | |||
| 466 | M | M.Xcacc2ORF2325P (100% identity) | M.XcaCORF466P | |
| 467 | anthranilate synthase component II | |||
| 2901 | 198 aa hypothetical protein | |||
| 2902 | M | M.Xcacc2ORF6130P (100% identity) | M.XcaCORF2902P | |
| 2903 | DNA-damage-inducible protein d | |||
| 2904 | S | S.Xcacc2ORF6130P (100% identity) | S.XcaCORF2902P | |
| 2905 | R | Xcacc2ORF6130P (100% identity) | XcaCORF2902P | |
| 2906 | 248 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2966 | 155 aa conserved hypothetical protein | |||
| 2967 | M | M.XciT8ORF20175P (99% identity) | M.XcaCORF2967P | |
| 2969 | phage-related capsid packaging protein | |||
| 3576 | IS1404 transposase | |||
| 3577 | R | Xcacc2ORF20495P (100% identity) | XcaCORF3577P | |
| 3578 | IS1481 transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 213 | 387 aa conserved hypothetical protein | |||
| 214 | M | M.Xcacc2ORF915P (100% identity) | M.XcaCORF214P | |
| 215 | R | Xcacc2ORF915P (100% identity) | XcaCORF214P | |
| 216 | haloalkane dehalogenase | |||
| 1066 | 102 aa conserved hypothetical protein | |||
| 1067 | R | XcaXc86ORFDP (100% identity) | XcaCORF1068P | |
| 1068 | M | M.XcaXc86ORFDP (100% identity) | M.XcaCORF1068P | |
| 1069 | DNA helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2731 | response regulator | |||
| 2732 | R | Xcacc2McrCP (100% identity) | XcaCMcrCP | |
| 2733 | R | Xcacc2McrBP (100% identity) | XcaCMcrBP | |
| 2734 | 71 aa hypothetical protein | |||
| 4189 | pseudouridylate synthase | |||
| ??? | R | XcaXca5Mrr2P (100% identity) | XcaCMrrP | |
| 4190 | IS1481 transposase | |||