Prosthecochloris species CIB 2401 |
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Putative Prosthecochloris species CIB 2401 RM systems
Ref: Nabhan,S. et al. unpublished
REBASE ref # 23103
Complete sequence: 2,399,849 bp
GenBank #: CP016432
REBASE acronym: Psp2401
Org_num: 19998
All begin Ptc2401_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 100 | pseudogene | |||
| 102 | M | M.Dac2973ORF1014P (86% identity) | CCAYNNNNNTGC | M.Psp2401I |
| 103 | 116 aa hypothetical protein | |||
| 104 | S | S.GsuRed1VI (51% identity) | CCAYNNNNNTGC | S.Psp2401I |
| 105 | 194 aa hypothetical protein | |||
| 106 | 307 aa hypothetical protein | |||
| 107 | R | Dac2973ORF1007P (81% identity) | CCAYNNNNNTGC | Psp2401IP |
| 108 | uridine/cytidine kinase | |||
| 167 | tRNA modification GTPase MnmE | |||
| 168 | M | M.Ssp52076ORF1580P (47% identity) | M.Psp2401ORF168P | |
| 169 | Virulence protein | |||
| 170 | S | EcoKI restriction-modification system protein | S.Psp2401ORF168P | |
| 171 | Divergent AAA domain protein | |||
| 1514 | Adenosine monophosphate-protein transferase | |||
| 1515 | R | GsuPLORF8925P (19% identity) | Psp2401ORF1515P | |
| 1516 | 49 aa hypothetical protein | |||
| 1522 | pseudogene | |||
| 1523 | M | M1.GbaNRL1ORF6110P (93% identity) | M.Psp2401ORF1523P | |
| 1524 | DNA binding domain, excisionase family | |||
| 1525 | AIG2-like family protein | |||
| 1526 | 64 aa hypothetical protein | |||
| 1527 | 144 aa hypothetical protein | |||
| 1528 | ADP-ribosyl-[dinitrogen reductase] hydrolase | |||
| 1529 | 5-methylcytosine-specific restriction enzyme | |||
| 1530 | Transposase DDE domain protein | |||
| 1532 | Group II intron-encoded protein LtrA | |||
| 1533 | Transposase DDE domain protein | |||
| 1535 | 168 aa hypothetical protein | |||
| 1536 | 5-methylcytosine-specific restriction enzyme B | |||
| 1537 | EcoKMrr | |||
| 1538 | S | S3.AspCCBEORF5805P (41% identity) | S.Psp2401ORF1523P | |
| 1540 | R | GsuPLORF8925P (88% identity) | Psp2401ORF1523P | |
| 1541 | Virulence protein | |||
| 1548 | 1236 aa hypothetical protein | |||
| 1549 | S | S.MboMS2ORF922P (20% identity) | GTANNNNNNNRTCG | S.Psp2401II |
| 1550 | M | M.Doe16959ORF2153P (70% identity) | GTANNNNNNNRTCG | M.Psp2401II |
| 1551 | R | Doe16959ORF2153P (65% identity) | GTANNNNNNNRTCG | Psp2401IIP |
| 1552 | DNA binding domain, excisionase family | |||
| 1667 | DNA helicase | |||
| 1668 | M | M.Cba1ORFDP (83% identity) | M.Psp2401ORF1668P | |
| 1669 | Transposase | |||
| 1670 | 578 aa hypothetical protein | |||
| 1671 | S | S.VcaS01ORF30059P (16% identity) | S.Psp2401ORF1668P | |
| 1672 | Transposase | |||
| 1704 | protein related to capsule | |||
| 1705 | M | M.PspZMORF11905P (96% identity) | M.Psp2401ORF1705P | |
| 1706 | 346 aa hypothetical protein | |||
| 1707 | S | S.Xsp857ORF11375P (31% identity) | S.Psp2401ORF1705P | |
| 1708 | transposase OrfB | |||
| 1709 | Transposase | |||
| 1710 | R | Type I restriction enzyme | Psp2401ORF1705P | |
| 1711 | 71 aa hypothetical protein | |||
| 2246 | 58 aa hypothetical protein | |||
| 2247 | R | Aba761ORF1832P (67% identity) | GACNNNNRTTG | Psp2401IIIP |
| 2248 | iron-sulfur cluster biosynthesis transcriptional | |||
| 2249 | DNA adenine methylase | |||
| 2250 | 442 aa hypothetical protein | |||
| 2251 | ATP-binding protein involved in | |||
| 2252 | 40 aa hypothetical protein | |||
| 2253 | S | S.DalAHTORF1004P (33% identity) | GACNNNNRTTG | S.Psp2401III |
| 2254 | ORF6N domain protein | |||
| 2255 | M | M.GspHR1ORF10025P (74% identity) | GACNNNNRTTG | M.Psp2401III |
| 2256 | DNA binding domain, excisionase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1048 | 85 aa hypothetical protein | |||
| 1049 | RM | CphBORF1677P (64% identity) | Psp2401ORF1049P | |
| 1050 | Transposase | |||
| 1408 | ATP-binding protein involved in | |||
| 1409 | RM | Sde240ORF2756P (66% identity) | Psp2401ORF1409P | |
| 1410 | Divergent AAA domain protein | |||
| 2248 | iron-sulfur cluster biosynthesis transcriptional | |||
| 2249 | M | M.Mji16571ORF1470P (55% identity) | M.Psp2401ORF2249P | |
| 2250 | R | MspH1ORFFP (12% identity) | Psp2401ORF2249P | |
| 2251 | ATP-binding protein involved in | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1454 | 188 aa hypothetical protein | |||
| 1455 | R | PspHL130ORF7130P (97% identity) | Psp2401ORF1456P | |
| 1456 | M | M.PspHL130ORF7130P (88% identity) | M.Psp2401ORF1456P | |
| 1457 | ORF6N domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 529 | 443 aa hypothetical protein | |||
| 530 | R | PspZMMrrP (64% identity) | Psp2401Mrr2P | |
| 531 | Sulfite exporter TauE/SafE | |||
| 1528 | ADP-ribosyl-[dinitrogen reductase] hydrolase | |||
| 1529 | R | DovoXyS1McrCP (58% identity) | R1.Psp2401McrCP | |
| 1530 | Transposase DDE domain protein | |||
| 1532 | Group II intron-encoded protein LtrA | |||
| 1533 | Transposase DDE domain protein | |||
| 1535 | R | PvuZN3McrCP (33% identity) | R2.Psp2401McrCP | |
| 1536 | R | PvuZN3McrBP (85% identity) | Psp2401McrBP | |
| 1537 | EcoKMrr | |||
| 1536 | 5-methylcytosine-specific restriction enzyme B | |||
| 1537 | R | DteS28bFMrrP (60% identity) | Psp2401MrrP | |
| 1538 | 245 aa hypothetical protein | |||