Bacteroides fragilis S14 |
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Putative Bacteroides fragilis S14 RM systems
Ref: Soki,J. et al. unpublished
REBASE ref # 22323
Complete sequence: 4,902,215 bp
GenBank #: CP012706
REBASE acronym: Bfr14
Org_num: 19707
All begin AE940_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2480 | toxin HipA | |||
| 2485 | C | C.Bfr9343DIIP (100% identity) | C.Bfr14ORF2490P | |
| 2490 | M | M.Bfr9343II (100% identity) | M.Bfr14ORF2490P | |
| ??? | S | S.Bfr9343II (100% identity) | S.Bfr14ORF2490P | |
| 2500 | R | Bfr9343IIP (99% identity) | Bfr14ORF2490P | |
| 2505 | 236 aa hypothetical protein | |||
| 3840 | 70 aa hypothetical protein | |||
| 3845 | C | C.Bsp2737ORF11960P (100% identity) | C.Bfr14ORF3855P | |
| ??? | R | BfaSORF1383P (100% identity) | Bfr14ORF3855P | |
| 3855 | M | M.Bsp2737ORF11960P (100% identity) | M.Bfr14ORF3855P | |
| 3860 | DNA-binding protein | |||
| 3865 | death-on-curing protein | |||
| 3870 | S | S1.Bfr67BORF10625P (99% identity) | S1.Bfr14ORF3855P | |
| 3875 | S | S.Bfr9343ORF3032P (71% identity) | S2.Bfr14ORF3855P | |
| 3880 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5330 | 161 aa hypothetical protein | |||
| 5335 | M | M.Bfr642ORF12495P (100% identity) | M.Bfr14ORF5335P | |
| 5340 | 78 aa hypothetical protein | |||
| 12830 | 128 aa hypothetical protein | |||
| 12835 | M | M.Bfr9343I (100% identity) | ATGCAT | M.Bfr14ORF12835P |
| 12840 | R | Bfr9343IP (100% identity) | ATGCAT | Bfr14ORF12835P |
| 12845 | 69 aa hypothetical protein | |||
| 15725 | XRE family transcriptional regulator | |||
| 15730 | M | M2.Lwa3933ORF1995P (12% identity) | GATC | M1.Bfr14ORF15730P |
| 15735 | M | M1.Pvu1ORF5740P (99% identity) | GATC | M2.Bfr14ORF15730P |
| 15740 | R | Pvu1ORF5740P (99% identity) | GATC | Bfr14ORF15730P |
| 15745 | M | M2.Pvu1ORF5740P (100% identity) | GATC | M3.Bfr14ORF15730P |
| 15750 | recombinase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2415 | pseudouridine synthase | |||
| 2420 | R | Bfr9ORF8795P (100% identity) | Bfr14ORF2425P | |
| 2425 | M | M.BfrFAAORFBP (99% identity) | M.Bfr14ORF2425P | |
| 2430 | alpha-xylosidase | |||