Frankia species Allo2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Frankia species Allo2 RM systems
Ref: Oshone,R. et al. unpublished
REBASE ref # 22023
Contig set: 5,336,979 bp
GenBank #: JPHT00000000 (NZ_JPHT00000000)
REBASE acronym: FspA2
Org_num: 19611
All begin ALLO2DRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 765 | Insertion element 4 transposase N-terminal | |||
| 766 | R | FspCcI6ORF4613P (99% identity) | FspA2ORF768P | |
| 767 | S | S.FspCcI6ORF4613P (100% identity) | S.FspA2ORF768P | |
| 768 | M | M.FspCcI6ORF4613P (100% identity) | M.FspA2ORF768P | |
| 769 | 56 aa hypothetical protein | |||
| 1899 | membrane-fusion protein | |||
| 1900 | R | FspCcI6ORF874P (99% identity) | FspA2ORF1902P | |
| 1901 | S | S.FspCcI6ORF874P (100% identity) | S.FspA2ORF1902P | |
| 1902 | M | M.FspCcI6ORF874P (99% identity) | M.FspA2ORF1902P | |
| 1903 | 76 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2717 | protein of unknown function (DUF1998) | |||
| 2718 | M | M.FspThrORF1852P (99% identity) | M.FspA2ORF2718P | |
| 2719 | serine/threonine protein kinase | |||
| 4243 | 1227 aa hypothetical protein | |||
| 4244 | RM | FspCcI6ORF3450P (99% identity) | FspA2ORF4244P | |
| 4245 | serine/threonine protein kinase | |||
| 4286 | 259 aa hypothetical protein | |||
| 4287 | R | FspCcI6ORF4439P (99% identity) | CTGCAG | FspA2ORF4288P |
| 4288 | M | M.FspCcI6ORF4439P (99% identity) | CTGCAG | M.FspA2ORF4288P |
| 4289 | 70 aa hypothetical protein | |||
| 4149 | 181 aa hypothetical protein | |||
| 4150 | RM | FspBRORF109324P (99% identity) | FspA2ORF4150P | |
| 4151 | DNA/RNA helicase, superfamily II, SNF2 family | |||
| 3648 | 105 aa hypothetical protein | |||
| ??? | M | M.FspThrORF1200P (100% identity) | CCCGGG | M.FspA2ORF3649P |
| 3650 | 97 aa hypothetical protein | |||
| 3387 | Protein of unknown function (DUF2637) | |||
| 3388 | M | M.FspCcI6ORF2866P (99% identity) | M.FspA2ORF3388P | |
| 3389 | 81 aa hypothetical protein | |||
| 2585 | 200 aa hypothetical protein | |||
| 2586 | V | V.FspCcI6ORF3335P (100% identity) | V.FspA2ORF2587P | |
| 2587 | M | M.FspCcI6ORF3335P (100% identity) | CCGCGG | M.FspA2ORF2587P |
| 2588 | 124 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2359 | 414 aa hypothetical protein | |||
| 2360 | R | FspCcI6McrBP (99% identity) | FspA2McrBP | |
| 2361 | R | FspThrMcrCP (99% identity) | FspA2McrCP | |
| 2362 | carbohydrate ABC transporter membrane protein 2, | |||