Escherichia coli 09-00049 |
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Putative Escherichia coli 09-00049 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 17577
| Sequence length: | GenBank #: | |
| Chromosome: | 5,286,558 bp | CP015228 |
| plasmid pCFSAN004180G: | 225,292 bp | CP012500 |
REBASE acronym: Eco09
Org_num: 19644
All begin GJ12_, GJ12_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25995 | 428 aa hypothetical protein | |||
| 26000 | S | S.SflN101ORF11895P (100% identity) | S.Eco09ORF26005P | |
| 26005 | M | M.SflN101ORF11895P (100% identity) | M.Eco09ORF26005P | |
| 26010 | 128 aa hypothetical protein | |||
| 26240 | endoribonuclease SymE | |||
| 26245 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco09I |
| 26250 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco09I |
| 26255 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco09IP |
| 26260 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1540 | 67 aa hypothetical protein | |||
| 1545 | M | M.EcoG089ORF1610P (100% identity) | M.Eco09ORF1545P | |
| 1565 | TciA | |||
| 3095 | 27 aa hypothetical protein | |||
| 3100 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco09ORF3100P |
| 3105 | cruciferin | |||
| 6180 | 70 aa hypothetical protein | |||
| 6185 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco09ORF6185P |
| 6190 | regulator | |||
| 6285 | 215 aa hypothetical protein | |||
| 6290 | R | Sso1099IP (100% identity) | CTGCAG | Eco09ORF6295P |
| 6295 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco09ORF6295P |
| 6300 | repressor | |||
| 8865 | 77 aa hypothetical protein | |||
| 8870 | M | M.EcoLSU61ORF15085P (100% identity) | GATC | M.Eco09ORF8870P |
| 8875 | 100 aa hypothetical protein G768_01573 | |||
| 12805 | multidrug DMT transporter | |||
| 12810 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco09DcmP |
| 12815 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco09Dcm |
| 12820 | hydrolase | |||
| 13055 | 180 aa hypothetical protein | |||
| 13070 | M | M.EcoG089ORF7640P (100% identity) | M.Eco09ORF13070P | |
| 13075 | TrmB family transcriptional regulator | |||
| 13120 | 60 aa hypothetical protein | |||
| 13125 | M | M.EcoRM9088ORF27690P (100% identity) | M.Eco09ORF13125P | |
| 13130 | 81 aa hypothetical protein | |||
| 15460 | DNA methylase | |||
| 15465 | S | S.EcoSO40ORF8270P (100% identity) | S.Eco09ORF15470P | |
| ??? | RM | EcoR811ORFDP (100% identity) | Eco09ORF15470P | |
| 15475 | 149 aa hypothetical protein | |||
| 15530 | repressor | |||
| 15535 | M | M.EcoG5295ORF7835P (100% identity) | CTGCAG | M.Eco09ORF15535P |
| 15540 | R | Sso1099IP (100% identity) | CTGCAG | Eco09ORF15535P |
| 15545 | 215 aa hypothetical protein | |||
| 20665 | Fis family transcriptional regulator | |||
| 20670 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco09ORF20670P |
| 20675 | 59 aa hypothetical protein | |||
| 21210 | ribulose phosphate epimerase | |||
| 21215 | M | DNA adenine methylase | GATC | M.Eco09DamP |
| 21220 | cell division protein DamX | |||
| 26570 | 67 aa hypothetical protein | |||
| 26575 | M | M.EcoG089ORF26245P (100% identity) | M.Eco09ORF26575P | |
| 26595 | TciA | |||
| plasmid pCFSAN004180G | ||||
| 665 | multidrug ABC transporter ATP-binding protein | |||
| 670 | M | M.EspP079ORF5449P (100% identity) | M.Eco09ORF670P | |
| 675 | PTS sugar transporter subunit IIA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26010 | 128 aa hypothetical protein | |||
| 26015 | R | SflN101McrCP (100% identity) | Eco09McrCP | |
| 26020 | R | SflN101McrBP (100% identity) | Eco09McrBP | |
| 26025 | restriction endonuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5935 | 146 aa hypothetical protein | |||
| 5940 | M | M.SflM2901ORF1630P (100% identity) | GATC | M.Eco09ORF5940P |
| 5945 | protein ninE | |||