Escherichia coli 06-00048 |
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Putative Escherichia coli 06-00048 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 17577
| Sequence length: | GenBank #: | |
| Chromosome: | 5,498,453 bp | CP015229 |
| plasmid pCFSAN004178P_02: | 213,847 bp | CP012498 |
REBASE acronym: Eco06
Org_num: 19641
All begin GJ11_, GJ11_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26900 | endoribonuclease SymE | |||
| 26905 | S | S.Eco42405ORF21135P (71% identity) | TTCANNNNNNNNCTGG | S.Eco06I |
| 26910 | M | M.SspS13ORF3945P (100% identity) | TTCANNNNNNNNCTGG | M.Eco06I |
| 26915 | R | SspS13ORF3945P (100% identity) | TTCANNNNNNNNCTGG | Eco06IP |
| 26920 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5440 | 81 aa hypothetical protein | |||
| 5445 | M | M.EspP049ORF1446P (100% identity) | M.Eco06ORF5445P | |
| 5450 | DNA ligase | |||
| 6830 | 81 aa hypothetical protein | |||
| 6835 | M | M.EspP049ORF1446P (100% identity) | M.Eco06ORF6835P | |
| 6840 | DNA ligase | |||
| 8320 | 138 aa hypothetical protein | |||
| 8325 | M | M.Eco06ORF10920P (100% identity) | M.Eco06ORF8325P | |
| 8330 | DNA ligase | |||
| 9270 | DNA recombinase | |||
| 9275 | M | M.Eco725ORF71P (99% identity) | M.Eco06ORF9275P | |
| 9290 | 93 aa hypothetical protein | |||
| 10915 | DNA ligase | |||
| 10920 | M | M.Eco06ORF8325P (100% identity) | M.Eco06ORF10920P | |
| 10925 | 138 aa hypothetical protein | |||
| 13240 | multidrug DMT transporter | |||
| 13245 | V | endonuclease | CCWGG | V.Eco06DcmP |
| 13250 | M | M.SflSTLE1DcmP (99% identity) | CCWGG | M.Eco06Dcm |
| 13255 | hydrolase | |||
| 13495 | 180 aa hypothetical protein | |||
| 13510 | M | M.EcoG089ORF7640P (100% identity) | M.Eco06ORF13510P | |
| 13515 | TrmB family transcriptional regulator | |||
| 13560 | 60 aa hypothetical protein | |||
| 13565 | M | M.EcoG089ORF7575P (98% identity) | M.Eco06ORF13565P | |
| 13570 | 75 aa hypothetical protein | |||
| 17170 | Shiga toxin subunit A | |||
| 17190 | M | DNA adenine methylase | M.Eco06ORF17190P | |
| 17195 | TrmB family transcriptional regulator | |||
| 21180 | Fis family transcriptional regulator | |||
| 21185 | M | M.Ecoi68ORF2692P (99% identity) | ATGCAT | M.Eco06ORF21185P |
| 21190 | 59 aa hypothetical protein | |||
| 21815 | ribulose phosphate epimerase | |||
| 21820 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco06DamP |
| 21825 | cell division protein DamX | |||
| 27175 | 162 aa hypothetical protein | |||
| 27180 | M | M.EcosA32ORF3630P (100% identity) | GATC | M.Eco06ORF27180P |
| 27185 | crossover junction endodeoxyribonuclease | |||
| plasmid pCFSAN004178P_02 | ||||
| 1440 | flagellar biosynthesis protein FlgC | |||
| 1445 | M | M.Eco771ORF11230P (97% identity) | M.Eco06ORF1445P | |
| 1450 | pseudogene | |||