Klebsiella pneumoniae KPNIH39 |
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Putative Klebsiella pneumoniae KPNIH39 RM systems
Ref: Conlan,S. et al. unpublished
REBASE ref # 21860
| Sequence length: | GenBank #: | |
| Chromosome: | 5,351,509 bp | CP014762 |
| plasmid pKPN-332: | 284,894 bp | CP014763 |
| plasmid pKpQIL-9b8: | 106,559 bp | CP014765 |
REBASE acronym: Kpn39
Org_num: 19766
All begin WM47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3170 | nuclease | |||
| 3175 | S | S.Kpnu28ORF24465P (100% identity) | CTAYNANNNNNRTCC | S.Kpn39III |
| 3180 | M | M.Kpnu28ORF24465P (100% identity) | CTAYNANNNNNRTCC | M.Kpn39III |
| 3185 | R | Kpnrf22ORF44100P (100% identity) | CTAYNANNNNNRTCC | Kpn39IIIP |
| 3190 | DNA helicase UvrD | |||
| plasmid pKpQIL-9b8 | ||||
| 28560 | transposase | |||
| 28565 | R | Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | Kpn39IIP |
| 28570 | S | S.Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | S.Kpn39II |
| 28575 | M | M.Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | M.Kpn39II |
| 28580 | resolvase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 440 | ribonuclease | |||
| 445 | M | M2.KpnEH13ORF16625P (98% identity) | GATC | M.Kpn39ORF445P |
| 450 | 125 aa hypothetical protein | |||
| 10285 | replication protein | |||
| 10290 | M | M.Kpn15kORF1725P (99% identity) | GATC | M.Kpn39ORF10290P |
| 10295 | crossover junction endodeoxyribonuclease | |||
| 17715 | multidrug DMT transporter | |||
| 17720 | V | V.Ksp2N3ORFEP (75% identity) | CCWGG | V.Kpn39IP |
| 17725 | M | M.KpnvKPORF8710P (100% identity) | CCWGG | M.Kpn39I |
| 17730 | hydrolase | |||
| 24595 | ribulose phosphate epimerase | |||
| 24600 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn39DamP |
| 24605 | cell division protein DamX | |||
| plasmid pKpQIL-9b8 | ||||
| 28615 | 76 aa hypothetical protein | |||
| 28620 | M | M.SmaBWH35ORF25885P (100% identity) | M.Kpn39ORF28620P | |
| 28625 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pKPN-332 | ||||
| 27425 | 328 aa hypothetical protein | |||
| 27430 | R | Kpn4574McrCP (100% identity) | Kpn39McrCP | |
| 27435 | R | Kpn15226McrBP (99% identity) | Kpn39McrBP | |
| 27440 | transposase | |||