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Putative Neisseria gonorrhoeae 34530 RM systems
Ref: Bharat,A. unpublished
REBASE ref # 22735
Complete sequence: 2,228,373 bp
GenBank #: CP016016
REBASE acronym: Ngo34530
Org_num: 19885
All begin A9Y60_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2680 | ADP-glyceromanno-heptose 6-epimerase | |||
2685 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo34530ORF2685P | |
2690 | DNA damage-inducible protein D | |||
2695 | S | S.NgoJH9ORFNP (100% identity) | S1.Ngo34530ORF2685P | |
??? | S | S2.NgoWOORF429P (100% identity) | S2.Ngo34530ORF2685P | |
2705 | R | NgoNCORF566P (100% identity) | Ngo34530ORF2685P | |
2710 | ATP-dependent Clp protease ATP-binding subunit | |||
5530 | ABC transporter | |||
5535 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo34530ORF5535P |
5540 | 279 aa hypothetical protein | |||
5545 | 186 aa hypothetical protein | |||
5550 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo34530ORF5535P |
5555 | 77 aa hypothetical protein | |||
??? | R | NgoWPIP (100% identity) | GAGNNNNNTAC | Ngo34530ORF5535P |
5565 | recombination factor protein RarA | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
35 | leucine--tRNA ligase | |||
40 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo34530ORF40P |
45 | DNA methyltransferase | |||
40 | restriction endonuclease | |||
45 | M | M.NgoWPORF8P (100% identity) | GATC | M.Ngo34530ORF45P |
50 | 0 aa hypothetical protein | |||
1150 | 48 aa hypothetical protein | |||
??? | M | M.NgoWSORF1801P (100% identity) | CCGG | M.Ngo34530ORF1155P |
1165 | R | NgoWSORF1801P (98% identity) | CCGG | Ngo34530ORF1155P |
1170 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo34530ORF1155P | |
1175 | replication initiation factor | |||
1515 | transposase | |||
1520 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo34530ORF1520P |
??? | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo34530ORF1520P |
1530 | excinuclease ABC subunit A | |||
2140 | phenylalanine--tRNA ligase subunit alpha | |||
2145 | V | V.NgoWSORF391P (100% identity) | V.Ngo34530ORF2150P | |
??? | M | M.NgoWSORF391P (100% identity) | M.Ngo34530ORF2150P | |
2160 | R | NgoWSORF391P (100% identity) | Ngo34530ORF2150P | |
2165 | phenylalanine--tRNA ligase subunit beta | |||
2430 | 215 aa hypothetical protein | |||
2435 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo34530ORF2435P |
2440 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo34530ORF2435P |
2445 | 140 aa hypothetical protein | |||
2465 | uroporphyrinogen decarboxylase | |||
2470 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo34530ORF2480P | |
2475 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo34530ORF2480P |
2480 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo34530ORF2480P |
2485 | 0 aa hypothetical protein | |||
4350 | 5-(carboxyamino)imidazole ribonucleotide | |||
4355 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo34530ORF4360P |
4360 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo34530ORF4360P |
4365 | anthranilate synthase component I | |||
5665 | 3-isopropylmalate dehydratase small subunit | |||
5670 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo34530ORF5670P |
5675 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo34530ORF5670P |
5680 | 3-isopropylmalate dehydrogenase | |||
10050 | cysteine--tRNA ligase | |||
10055 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo34530ORF10060P |
10060 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo34530ORF10060P |
10065 | GTPase ObgE | |||
10595 | RNA-binding transcriptional accessory protein | |||
10600 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo34530ORF10600P |
10605 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo34530ORF10600P |
10610 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo34530ORF10600P |
10615 | 93 aa hypothetical protein | |||
11220 | ribosome recycling factor | |||
11225 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo34530ORF11225P |
11230 | R | type II restriction endonuclease | GGCC | Ngo34530ORF11225P |
11235 | 375 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
5850 | tRNA pseudouridine(55) synthase TruB | |||
5855 | M | M.Ngo9112ORF5535P (100% identity) | GCAGA | M.Ngo34530ORF5855P |
5860 | R | NgoNCORF1272P (100% identity) | GCAGA | Ngo34530ORF5855P |
5865 | alpha-hydroxy-acid oxidizing enzyme | |||
6345 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
6350 | R | NgoWPIIP (100% identity) | CCACC | Ngo34530ORF6355P |
6355 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo34530ORF6355P |
6360 | peptidylprolyl isomerase |