Escherichia coli O157:H7 FRIK2069 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 FRIK2069 RM systems
Ref: Kasper,C. et al. unpublished
REBASE ref # 22406
| Sequence length: | GenBank #: | |
| Chromosome: | 5,645,226 bp | CP015846 |
| plasmid p0157: | 95,599 bp | CP015847 |
REBASE acronym: Eco2069
Org_num: 19866
All begin A8V30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 28750 | 113 aa hypothetical protein | |||
| 28755 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2069ORF28760P |
| 28760 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco2069ORF28760P |
| 28765 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2069ORF28760P |
| 28770 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1445 | PerC family transcriptional regulator | |||
| 1450 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco2069ORF1450P |
| 1455 | LexA family transcriptional regulator | |||
| 30470 | lipoprotein | |||
| 9220 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2069ORF9220P | |
| 30475 | 61 aa hypothetical protein | |||
| 9575 | TrmB family transcriptional regulator | |||
| 9580 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco2069ORF9580P | |
| 30565 | 38 aa hypothetical protein | |||
| 14050 | drug/metabolite exporter YedA | |||
| 14055 | V | V.EcosPA8DcmP (100% identity) | V.Eco2069DcmP | |
| 14060 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2069DcmP |
| 14065 | phosphohydrolase | |||
| 14880 | NinE family protein | |||
| 14885 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2069ORF14885P |
| 14890 | recombination protein NinB | |||
| 31225 | NinE family protein | |||
| 16150 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2069ORF16150P |
| 16155 | recombination protein NinB | |||
| 22450 | Fis family transcriptional regulator | |||
| 22455 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2069ORF22455P |
| 22460 | transporter | |||
| 22985 | ribulose-phosphate 3-epimerase | |||
| 22990 | M | DNA adenine methylase | GATC | M.Eco2069DamP |
| 22995 | protein DamX | |||
| 27170 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco2069ORFAP | |
| 27185 | Eae protein | |||
| 28365 | integrase | |||
| 28370 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2069ORF28380P |
| ??? | R | EcoS3ORF17765P (100% identity) | RGGNCCY | Eco2069ORF28380P |
| 28380 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco2069ORF28380P |
| 28385 | Polarity suppression protein | |||
| 28480 | ATP-dependent helicase | |||
| 28485 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2069ORF28485P |
| plasmid p0157 | ||||
| 29275 | 73 aa hypothetical protein | |||
| 29270 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2069ORF29270P | |
| 29265 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 28740 | DUF262 domain-containing protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco2069GmrDP | |
| 28750 | 113 aa hypothetical protein | |||