Pectobacterium carotovorum subsp. carotovorum PC1 |
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Putative Pectobacterium carotovorum subsp. carotovorum PC1 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 11168
Complete sequence: 4,862,913 bp
GenBank #: CP001657 (NC_012917)
REBASE acronym: PcaPC1
Org_num: 5475
All begin PC1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 860 | protein of unknown function DUF45 | |||
| 861 | R | BspIr50ORF18535P (97% identity) | PcaPC1ORF865P | |
| 862 | Appr-1-p processing domain protein | |||
| 863 | 218 aa conserved hypothetical protein | |||
| 864 | S | S.Kpn342ORF4976P (58% identity) | S.PcaPC1ORF865P | |
| 865 | M | M.LposN51ORFCP (95% identity) | M.PcaPC1ORF865P | |
| 866 | 79 aa conserved hypothetical protein | |||
| 2874 | 555 aa conserved hypothetical protein | |||
| 2875 | S | S.Kae1464ORF21840P (47% identity) | S.PcaPC1ORF2876P | |
| 2876 | M | M.SmamS71ORF2490P (90% identity) | M.PcaPC1ORF2876P | |
| 2877 | R | PcaZJ42ORF15125P (98% identity) | PcaPC1ORF2876P | |
| 2878 | phage transcriptional regulator, AlpA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2635 | 192 aa conserved hypothetical protein | |||
| 2636 | M | M.Pca251ORF13960P (79% identity) | GATC | M.PcaPC1ORF2636P |
| 2637 | 97 aa hypothetical protein | |||
| 3879 | ribulose-phosphate 3-epimerase | |||
| 3880 | M | M.PcaPCC51ORFBP (99% identity) | GATC | M.PcaPC1DamP |
| 3881 | Sporulation domain protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 847 | integrase family protein | |||
| 848 | M | M.Pbr1719ORF11200P (99% identity) | M.PcaPC1ORF848P | |
| 849 | R | Pbr1719ORF11200P (99% identity) | PcaPC1ORF848P | |
| 850 | type III restriction protein res subunit | |||
| 849 | Type III site-specific deoxyribonuclease | |||
| 850 | R | Dsp1600ORFFP (98% identity) | PcaPC1ORF851P | |
| 851 | M | M.Dch1ORF18975P (98% identity) | M.PcaPC1ORF851P | |
| 852 | 49 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2310 | 270 aa hypothetical protein | |||
| 2311 | R | YenY4I (37% identity) | PcaPC1McrBP | |
| 2312 | pseudogene | |||