Xylella fastidiosa subsp. fastidiosa Stag's Leap |
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Putative Xylella fastidiosa subsp. fastidiosa Stag's Leap RM systems
Ref: Chen,J. et al. Genome Announc 4 (2) (2016)
REBASE ref # 22008
Contig set: 2,510,798 bp
GenBank #: LSMJ00000000 (NZ_LSMJ00000000)
REBASE acronym: XfaSL
Org_num: 19503
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 769 | 122 aa hypothetical protein | |||
| ??? | R | XfasSLORF1215P (99% identity) | XfaSLORFBP | |
| ??? | S | S.XfasSLORF1215P (100% identity) | S.XfaSLORFBP | |
| ??? | M | M.Xfa35879ORF1345P (95% identity) | M.XfaSLORFBP | |
| 798 | 68 aa hypothetical protein | |||
| 1047 | 105 aa hypothetical protein XF_2720 | |||
| ??? | R | Xfav13ORF11050P (100% identity) | XfaSLORFJP | |
| 1057 | S | S.XfasSLORF11075P (100% identity) | S.XfaSLORFJP | |
| ??? | M | M.XfasSLORF11075P (100% identity) | M.XfaSLORFJP | |
| 1069 | 172 aa hypothetical protein Xfasm12_2270 | |||
| 1071 | 208 aa hypothetical protein D934_00595 | |||
| 1072 | R | XfasSLORF11100P (100% identity) | XfaSLORFKP | |
| 1080 | S | S.Xfav13ORF11075P (100% identity) | S.XfaSLORFKP | |
| 1082 | 88 aa hypothetical protein XFEB_00217 | |||
| 1083 | M | M.Xfav13ORF11075P (100% identity) | M.XfaSLORFKP | |
| 1086 | 118 aa hypothetical protein XFEB_00215 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 232 | 67 aa hypothetical protein | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | GCATGC | M.XfaSLORFEP |
| 237 | 64 aa hypothetical protein | |||
| 317 | phage-related lysozyme | |||
| 319 | M | M.Xfav13ORF7095P (100% identity) | M.XfaSLORFFP | |
| 323 | 87 aa hypothetical protein D934_10665 | |||
| 357 | phosphotyrosine protein phosphatase | |||
| 361 | M | M.Xfav13ORF7170P (100% identity) | M.XfaSLORFGP | |
| 365 | 60 aa hypothetical protein | |||
| 905 | histidine kinase | |||
| 911 | M | M.XfaReb2ORFIP (100% identity) | GTCGAC | M.XfaSLORFCP |
| 915 | R | XfasSLORF3075P (100% identity) | XfaSLORFCP | |
| 919 | 353 aa hypothetical protein XFEB_01950 | |||
| 1268 | 206 aa hypothetical protein | |||
| 1269 | M | M.XfaReb2ORFBP (99% identity) | TTCGAA | M.XfaSLORFHP |
| 1273 | R | XfasSLORF8640P (100% identity) | TTCGAA | XfaSLORFHP |
| 1278 | 73 aa hypothetical protein | |||
| 1399 | 60 aa hypothetical protein | |||
| ??? | R | XfasORF3006P (100% identity) | CCSGG | XfaSLORFIP |
| ??? | M | M.XfaTORF1649P (100% identity) | CCSGG | M.XfaSLORFIP |
| 1410 | 65 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1817 | 127 aa hypothetical protein | |||
| 1821 | M | M.Xfav13ORF4440P (100% identity) | M.XfaSLORFDP | |
| 1825 | R | XfaReb2ORFAP (99% identity) | XfaSLORFDP | |
| 1831 | alpha/beta hydrolase | |||