Clostridium paradoxum JW-YL-7 |
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Putative Clostridium paradoxum JW-YL-7 RM systems
Ref: Lancaster,W.A. et al. Genome Announc 4 (3) (2016)
REBASE ref # 21982
GenBank #: LSFY00000000
REBASE acronym: CpaYL7
Org_num: 19490
All begin JWYL7_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 250 | transcriptional regulator, XRE family | |||
| 251 | M | M.Dsa2ORF12305P (97% identity) | CTANNNNNNTAG | M.CpaYL7I |
| 252 | S | S.SspNJN17ORF16095P (61% identity) | CTANNNNNNTAG | S.CpaYL7I |
| 253 | 327 aa hypothetical protein | |||
| 254 | R | Dsa2ORF12225P (99% identity) | CTANNNNNNTAG | CpaYL7IP |
| 255 | 88 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 567 | 259 aa hypothetical protein | |||
| 568 | R | M.AspXH2ORF7610P (22% identity) | CTGCAG | CpaYL7IIIP |
| 569 | M | M.BceVD184ORF5838P (53% identity) | CTGCAG | M.CpaYL7III |
| 570 | integrase family protein | |||
| 928 | small acid-soluble spore protein alpha/beta | |||
| 929 | M | M.Cth7309ORF4610P (46% identity) | CAAAAA | M.CpaYL7II |
| 930 | 110 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1256 | DNA polymerase I | |||
| 1257 | R | Mho15978ORF2583P (59% identity) | GTCAT | CpaYL7ORF1258P |
| 1258 | M | M.CthIII (66% identity) | M.CpaYL7ORF1258P | |
| 1259 | Protein of unknown function DUF4391 | |||
| 1793 | 128 aa hypothetical protein | |||
| 1794 | R | AtyLL002ORFIP (50% identity) | CpaYL7ORF1795P | |
| 1795 | M | M.SspNJN17ORF1095P (70% identity) | M.CpaYL7ORF1795P | |
| 1796 | Resolvase domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 273 | Heme-transporting ATPase | |||
| 274 | R | Dni574McrCP (84% identity) | CpaYL7McrCP | |
| 275 | R | LjeGMcrBP (54% identity) | CpaYL7McrBP | |
| 276 | Integrase catalytic region | |||