Salmonella enterica subsp. enterica ADRDL-LA-9-2014 |
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Putative Salmonella enterica subsp. enterica ADRDL-LA-9-2014 RM systems
Ref: Amachawadi,R.G. et al. Genome Announc 4 (3) (2016)
REBASE ref # 21974
Contig set: 4,870,086 bp
GenBank #: LSLZ00000000 (NZ_LSLZ00000000)
REBASE acronym: SenLA9
Org_num: 19501
All begin AGQ63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15360 | molecular chaperone Tir | |||
| 15365 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.SenLA9ORF15365P |
| 15370 | M | M2.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M2.SenLA9ORF15365P |
| 15375 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.SenLA9ORF15365P |
| 15380 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | SenLA9ORF15365P |
| 15385 | cell filamentation protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23360 | ATPase | |||
| 23365 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.SenLA9ORF23365P |
| 23370 | 97 aa hypothetical protein | |||
| 23315 | 98 aa hypothetical protein | |||
| 23320 | M | M.SenYU39ORF1896P (100% identity) | M.SenLA9ORF23320P | |
| 23325 | translation inhibitor protein RaiA | |||
| 22035 | 54 aa hypothetical protein | |||
| 22040 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLA9ORF22040P |
| 22045 | transposase | |||
| 19425 | 380 aa hypothetical protein | |||
| 19430 | R | SspS13ORF1655P (100% identity) | GTCGAC | SenLA9ORF19435P |
| 19435 | M | M.SspS13ORF1655P (100% identity) | CTCGAG | M.SenLA9ORF19435P |
| 19440 | replication protein A | |||
| 23115 | cell division protein DamX | |||
| 23120 | M | M.StyTDamP (100% identity) | GATC | M.SenLA9DamP |
| 23125 | ribulose phosphate epimerase | |||
| 3605 | hydrolase | |||
| 3610 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.SenLA9DcmP |
| 3615 | V | V.StyUK1DcmP (100% identity) | V.SenLA9DcmP | |
| 3620 | drug/metabolite exporter YedA | |||
| 6770 | endonuclease | |||
| 6775 | M | M.SenS0722ORF17610P (100% identity) | GATC | M.SenLA9ORF6775P |
| 6780 | 75 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9815 | sugar transporter | |||
| 9820 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenLA9ORF9820P |
| 9825 | R | SenSA5ORF13013P (100% identity) | CAGAG | SenLA9ORF9820P |
| 9830 | 33 aa hypothetical protein | |||