Salmonella enterica subsp. enterica ADRDL-LA-1-2013 |
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Putative Salmonella enterica subsp. enterica ADRDL-LA-1-2013 RM systems
Ref: Amachawadi,R.G. et al. Genome Announc 4 (3) (2016)
REBASE ref # 21974
Contig set: 4,955,079 bp
GenBank #: LSLN00000000 (NZ_LSLN00000000)
REBASE acronym: SenLA1
Org_num: 19493
All begin AGQ45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5035 | 106 aa hypothetical protein | |||
| 5040 | S | S.SenXB08ORF19780P (100% identity) | S.SenLA1ORF5045P | |
| 5045 | M | M.SenXB08ORF19780P (100% identity) | M.SenLA1ORF5045P | |
| 5050 | R | SenXB08ORF19780P (100% identity) | SenLA1ORF5045P | |
| 5055 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22345 | 109 aa hypothetical protein | |||
| 22350 | M | M.SenU1590ORF19885P (100% identity) | GATC | M.SenLA1ORF22350P |
| 22355 | replication protein A | |||
| 22540 | 75 aa hypothetical protein | |||
| 22545 | M | M.SenU1590ORF19690P (100% identity) | GATC | M.SenLA1ORF22545P |
| 22550 | endonuclease | |||
| 10800 | drug/metabolite exporter YedA | |||
| 10805 | V | V.StyUK1DcmP (100% identity) | V.SenLA1DcmP | |
| 10810 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.SenLA1DcmP |
| 10815 | hydrolase | |||
| 16640 | cell division protein DamX | |||
| 16645 | M | M.StyTDamP (100% identity) | GATC | M.SenLA1DamP |
| 16650 | ribulose phosphate epimerase | |||
| 7120 | endopeptidase | |||
| ??? | M | M.SenU1590ORF11730P (100% identity) | M.SenLA1ORF7125P | |
| 7130 | lysozyme | |||
| 7170 | methyltransferase | |||
| 7175 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.SenLA1ORF7175P |
| 7180 | 82 aa hypothetical protein | |||
| 4880 | histidine kinase | |||
| 4885 | M | M.SenXB08ORF19920P (100% identity) | RCCGGY | M.SenLA1ORF4885P |
| 4890 | transposase | |||
| 3135 | Fis family transcriptional regulator | |||
| 3140 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLA1ORF3140P |
| 3145 | 54 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13070 | 33 aa hypothetical protein | |||
| ??? | R | SspA292ORF17210P (100% identity) | CAGAG | SenLA1ORF13080P |
| 13080 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.SenLA1ORF13080P |
| 13085 | sugar transporter | |||