Bartonella grahamii as4aup |
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Putative Bartonella grahamii as4aup RM systems
Ref: Berglund,E.C. et al. PLoS Genet. 5 (7), e1000546 (2009)
REBASE ref # 11143
Complete sequence: 2,341,328 bp
GenBank #: CP001562 (NC_012846)
REBASE acronym: Bgr4
Org_num: 5456
All begin Bgr_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3210 | 72 aa hypothetical membrane protein | |||
| 3220 | M | M.Bgr4ORF8610P (100% identity) | M.Bgr4ORF3220P | |
| 3230 | transcriptional regulator | |||
| 3370 | phage tail sheath protein FI | |||
| 3380 | M | M.BspTAORFIP (83% identity) | M.Bgr4ORF3380P | |
| 3390 | phage tail collar protein | |||
| 4280 | glutamate-cysteine ligase | |||
| 4290 | RM | DNA damage-inducible protein | Bgr4ORF4290P | |
| 4300 | sodium/dicarboxylate symporter | |||
| 7830 | pseudogene | |||
| 7840 | RM | BtrCIPORF1080P (89% identity) | Bgr4ORF7840P | |
| 7850 | hemolysin activator protein Hec | |||
| 8050 | pseudogene | |||
| 8060 | RM | Btr166ORF2347P (89% identity) | Bgr4ORF8060P | |
| 8070 | hemolysin activator protein Hec | |||
| 8280 | DNA-damage-inducible protein J | |||
| 8290 | RM | helicase/methyltransferase | Bgr4ORF8290P | |
| 8300 | hemolysin activator protein Hec | |||
| 8560 | 72 aa hypothetical membrane protein | |||
| 8570 | M | M.Bgr4ORF8610P (87% identity) | M.Bgr4ORF8570P | |
| 8580 | 65 aa hypothetical protein | |||
| 8600 | 72 aa hypothetical membrane protein | |||
| 8610 | M | M.Bgr4ORF3220P (100% identity) | M.Bgr4ORF8610P | |
| 8620 | phage integrase | |||
| 9150 | transcriptional regulator | |||
| 9160 | M | M.Bgr01ORFBP (100% identity) | M.Bgr4ORF9160P | |
| 9170 | 171 aa hypothetical membrane protein | |||
| 11690 | pseudogene | |||
| 11700 | M | M.Bgl2ORFDP (91% identity) | M.Bgr4ORF11700P | |
| 11710 | 72 aa hypothetical membrane protein | |||
| 12820 | DNA-damage-inducible protein J | |||
| ??? | RM | Bdo12862ORF1608P (85% identity) | Bgr4ORF12830P | |
| 12840 | 338 aa hypothetical protein | |||
| 15220 | hemolysin activator protein Hec | |||
| 15230 | RM | helicase/methyltransferase | Bgr4ORF15230P | |
| 15260 | DNA-damage-inducible protein J | |||
| 15830 | pseudogene | |||
| 15840 | RM | Bgr4ORF17060P (100% identity) | Bgr4ORF15840P | |
| 15850 | 535 aa hypothetical protein | |||
| 17050 | 870 aa hypothetical protein | |||
| 17060 | RM | Bgr4ORF15840P (100% identity) | Bgr4ORF17060P | |
| 17070 | 535 aa hypothetical protein | |||
| 18950 | 229 aa hypothetical membrane protein | |||
| 18960 | RM | Bgr01ORFAP (92% identity) | Bgr4ORF18960P | |
| 18970 | ABC transporter, ATP-binding protein | |||
| 19480 | cobalamin biosynthesis protein CobT2 | |||
| 19490 | R | Bsp46AORF11050P (81% identity) | GGCC | Bgr4ORF19490P |
| 19500 | M | M.Bsp46AORF11050P (68% identity) | M.Bgr4ORF19490P | |
| 19510 | pseudogene | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4090 | pseudogene | |||
| 4100 | M | M2.BkrB714ORF960P (65% identity) | M.Bgr4ORF4100P | |
| 4110 | R | BkrB12M1ORF950P (90% identity) | Bgr4ORF4100P | |
| 4120 | MccC-like permease | |||
| 10670 | 133 aa hypothetical protein | |||
| 10680 | M | M.Bgr02ORFDP (94% identity) | M.Bgr4ORF10680P | |
| 10690 | R | Bgr02ORFDP (94% identity) | Bgr4ORF10680P | |
| 10700 | 312 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4860 | haloacid dehalogenase-like hydrolase | |||
| 4870 | M | M.BspTAORFEP (99% identity) | GANTC | M.Bgr4ORF4870P |
| 4880 | A/G-specific adenine glycosylase MutY | |||