Chlorobium limicola Frasassi |
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Putative Chlorobium limicola Frasassi RM systems
Ref: Mansor,M. and Macalady,J.L. Genome Announc 4 (3) (2016)
REBASE ref # 21955
Contig set: 2,087,449 bp
GenBank #: LMBR00000000 (NZ_LMBR00000000)
REBASE acronym: CliF
Org_num: 19382
All begin ASB62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 735 | S | S.Dba7044II (28% identity) | S.CliFORF750P | |
| 740 | damage-inducible protein D | |||
| 745 | 89 aa hypothetical protein | |||
| 750 | M | M.GsuPLORF8925P (88% identity) | M.CliFORF750P | |
| 755 | 192 aa hypothetical protein | |||
| 3295 | 219 aa hypothetical protein | |||
| 3300 | S | S.MhoHB1ORF3702P (4% identity) | S.CliFORF3300P | |
| 3305 | R | GurSL11ORF4530P (84% identity) | CliFORF3300P | |
| 3310 | transposase | |||
| 9655 | S | S.Dba7044II (21% identity) | S.CliFORF9655P | |
| 9660 | 187 aa hypothetical protein | |||
| 9665 | cell filamentation protein Fic | |||
| 9670 | R | GsuPLORF8925P (86% identity) | CliFORF9670P | |
| 9675 | metal-dependent hydrolase | |||
| 8685 | 61 aa hypothetical protein | |||
| 8690 | M | M.Psp2401ORF1523P (90% identity) | M1.CliFORF8690P | |
| 8695 | 507 aa hypothetical protein | |||
| 8700 | M | M2.GurSL11ORF4530P (85% identity) | M2.CliFORF8690P | |
| 8705 | 273 aa hypothetical protein | |||
| 8710 | 438 aa hypothetical protein | |||
| 8715 | S | S.DbaKI (86% identity) | S.CliFORF8690P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5240 | pseudogene | |||
| 5245 | M | M.Cli245ORF1593P (89% identity) | CAGCTG | M.CliFORF5245P |
| 9655 | 112 aa hypothetical protein | |||
| 9660 | M | 187 aa hypothetical protein | M.CliFORF9660P | |
| 9665 | cell filamentation protein Fic | |||
| 4250 | 106 aa hypothetical protein | |||
| 4255 | M | M.Cli245ORF54P (45% identity) | CTAG | M.CliFORF4255P |
| 8920 | 211 aa hypothetical protein | |||
| 8925 | RM | Saf8902III (60% identity) | CliFORF8925P | |
| 8930 | CAAX protease | |||
| 3905 | 343 aa hypothetical protein | |||
| 3910 | M | M.CphBORF2496P (87% identity) | M.CliFORF3910P | |
| 3915 | AAA+ family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3405 | M | 163 aa hypothetical protein | M.CliFORF3405P | |
| 3410 | 70 aa hypothetical protein | |||
| ??? | M | M.GliD10ORF1970P (17% identity) | M.CliFORF6330P | |
| 6335 | DNA-binding protein | |||
| 6340 | death-on-curing protein | |||
| 6345 | R | GliD10ORF1970P (81% identity) | CliFORF6330P | |
| 9610 | GTP-binding protein | |||
| 9615 | M | M.Psp1101ORF13965P (57% identity) | M.CliFORF9615P | |
| 9620 | 389 aa hypothetical protein | |||
| 9625 | R | CphBORF705P (94% identity) | CliFORF9615P | |