Geobacillus species WCH70 |
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Putative Geobacillus species WCH70 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 21943
| Sequence length: | GenBank #: | |
| Chromosome: | 3,464,618 bp | CP001638 (NC_012793) |
| plasmid pWCH7001: | 33,899 bp | CP001639 (NC_012794) |
| plasmid pWCH7002: | 10,287 bp | CP001640 (NC_012790) |
REBASE acronym: GspWCH
Org_num: 5451
All begin GWCH70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1641 | 173 aa hypothetical protein | |||
| 1642 | R | Gto4110ORF1801P (98% identity) | GspWCHORF1644P | |
| 1643 | S | S.BssSII (61% identity) | S.GspWCHORF1644P | |
| 1644 | M | M.Gto4110ORF1801P (98% identity) | M.GspWCHORF1644P | |
| 1646 | 177 aa conserved hypothetical protein | |||
| plasmid pWCH7001 | ||||
| 3441 | 86 aa hypothetical protein | |||
| 3442 | M | M1.BcoXORFEP (95% identity) | M.GspWCHORF3440P | |
| 3443 | S | S.ShaVSI35ORF135P (47% identity) | S.GspWCHORF3440P | |
| 3444 | R | BcoXORFEP (98% identity) | GspWCHORF3440P | |
| 3445 | integrase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1298 | 1183 aa conserved hypothetical protein | |||
| 1299 | RM | GstP3ORF4795P (72% identity) | GspWCHORF1299P | |
| 1300 | PglZ domain protein | |||
| plasmid pWCH7002 | ||||
| 3471 | replication protein | |||
| 3472 | M | M.BceVDM21ORF4869P (83% identity) | GGWCC | M.GspWCHORF3472P |
| 3473 | R | CdiRSS13ORF205P (52% identity) | GGWCC | GspWCHORF3472P |
| 3474 | 122 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2065 | peptidase M29 aminopeptidase II | |||
| 2067 | R | GspE263ORFCP (99% identity) | GspWCHORF2068P | |
| 2068 | M | M.GspE263ORFCP (100% identity) | M.GspWCHORF2068P | |
| 2069 | SNF2-related protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 356 | mutator MutT protein | |||
| 357 | R | Gsp44CORF10175P (99% identity) | GspWCHORF357P | |
| 358 | oxidoreductase domain protein | |||
| 1382 | pseudogene | |||
| 1385 | R | GspCX412McrBP (100% identity) | GspWCHMcrBP | |
| 1386 | R | GspCX412McrCP (98% identity) | GspWCHMcrCP | |
| 1387 | transposase IS4 family protein | |||
| 1405 | transposase IS4 family protein | |||
| 1406 | R | Gsp52MrrP (81% identity) | GspWCHMrrP | |
| 1407 | PTS modulated transcriptional regulator, MtlR | |||