Escherichia fergusonii GTA-EF04 |
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Putative Escherichia fergusonii GTA-EF04 RM systems
Ref: Manninger,P. et al. Genome Announc 4 (2) (2016)
REBASE ref # 21897
Contig set: 4,644,753 bp
GenBank #: JZWP00000000 (NZ_JZWP00000000)
REBASE acronym: EfeEF04
Org_num: 19347
All begin VL22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 213410 | 113 aa hypothetical protein | |||
| 213415 | S | S.Efe31C13ORF10510P (100% identity) | S.EfeEF04ORF213420P | |
| 213420 | M | M.SspS13ORF3945P (100% identity) | M.EfeEF04ORF213420P | |
| 213425 | R | EfeEF31ORF18020P (100% identity) | EfeEF04ORF213420P | |
| 213430 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 220965 | transposase | |||
| 220970 | R | Efe31C13ORF10580P (100% identity) | GGTACC | EfeEF04ORF220975P |
| 220975 | M | M.Efe35471ORFHP (100% identity) | GGTACC | M.EfeEF04ORF220975P |
| 220980 | DUF4868 domain-containing protein | |||
| 200190 | TrmB family transcriptional regulator | |||
| 200195 | M | M.Efe35471ORFGP (100% identity) | M.EfeEF04ORF200195P | |
| 200200 | 76 aa hypothetical protein | |||
| 210175 | ribulose phosphate epimerase | |||
| 210180 | M | M.Efe9LTDamP (100% identity) | GATC | M.EfeEF04DamP |
| 210185 | cell division protein DamX | |||
| 201435 | 263 aa hypothetical protein | |||
| 201440 | M | M.CsaH322ORF21045P (86% identity) | GATC | M.EfeEF04ORF201440P |
| 201445 | 76 aa hypothetical protein | |||
| 209895 | Fis family transcriptional regulator | |||
| ??? | M | M.EfeIV (100% identity) | ATGCAT | M.EfeEF04ORF209900P |
| 209905 | transcriptional regulator | |||
| 222730 | transcriptional repressor IclR | |||
| 222735 | M | M.EfeLTORF39400P (100% identity) | CCWGG | M.EfeEF04ORF222735P |
| 222740 | bifunctional isocitrate dehydrogenase | |||