Escherichia fergusonii GTA-EF02 |
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Putative Escherichia fergusonii GTA-EF02 RM systems
Ref: Manninger,P. et al. Genome Announc 4 (2) (2016)
REBASE ref # 21897
Contig set: 4,764,067 bp
GenBank #: JZWQ00000000 (NZ_JZWQ00000000)
REBASE acronym: EfeEF02
Org_num: 19348
All begin VP22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 206720 | alcohol dehydrogenase | |||
| 206730 | R | Efe42C24ORF17940P (100% identity) | EfeEF02ORF206740P | |
| 206735 | S | S.EfeC23ORF19320P (100% identity) | S.EfeEF02ORF206740P | |
| 206740 | M | M.Efe42C24ORF17940P (100% identity) | M.EfeEF02ORF206740P | |
| 206745 | restriction endonuclease subunit M | |||
| 206820 | 113 aa hypothetical protein | |||
| 206825 | S | S.EfeC23ORF19220P (100% identity) | S.EfeEF02ORF206830P | |
| 206830 | M | M.EfeC23ORF19220P (100% identity) | M.EfeEF02ORF206830P | |
| 206835 | R | EfeC23ORF19220P (100% identity) | EfeEF02ORF206830P | |
| 206840 | cell filamentation protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 206075 | transcriptional regulator | |||
| ??? | M | M.EfeIV (100% identity) | ATGCAT | M.EfeEF02ORF206080P |
| 206085 | Fis family transcriptional regulator | |||
| 219390 | 90 aa hypothetical protein | |||
| 219395 | M | M.EfeEF02ORF219620P (100% identity) | M.EfeEF02ORF219395P | |
| 219400 | 75 aa hypothetical protein | |||
| 220185 | ribulose phosphate epimerase | |||
| 220190 | M | M.EfeTDamP (100% identity) | GATC | M.EfeEF02DamP |
| 220195 | cell division protein DamX | |||
| 219615 | 75 aa hypothetical protein | |||
| 219620 | M | M.EfeEF02ORF219395P (100% identity) | M.EfeEF02ORF219620P | |
| 219625 | 90 aa hypothetical protein | |||
| 200995 | 27 aa hypothetical protein | |||
| 201000 | M | M.EmaW492ORF14550P (99% identity) | GATC | M.EfeEF02ORF201000P |
| 201005 | cruciferin | |||
| 205875 | crossover junction endodeoxyribonuclease | |||
| 205880 | M | M.Sen24770ORF310P (100% identity) | GATC | M.EfeEF02ORF205880P |
| 205885 | pseudogene | |||
| 209650 | transcriptional repressor IclR | |||
| 209655 | M | M.EfeLTORF39400P (99% identity) | CCWGG | M.EfeEF02ORF209655P |
| 209660 | bifunctional isocitrate dehydrogenase | |||
| 204270 | 146 aa hypothetical protein | |||
| 204275 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EfeEF02ORF204275P |
| 204280 | protein ninE | |||
| 218340 | 65 aa hypothetical protein | |||
| 218345 | M | M.Sen7113ORF20540P (100% identity) | M.EfeEF02ORF218345P | |
| 218350 | flagella biosynthesis regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 213195 | integrase | |||
| 213200 | R | EcoOR02AORF25160P (100% identity) | YCGR | EfeEF02ORF213200P |
| 213205 | DNA-invertase | |||
| 206745 | restriction endonuclease subunit M | |||
| 206750 | R | EfeC23McrBP (100% identity) | EfeEF02McrB2P | |
| 206755 | R | EfeC23McrCP (100% identity) | EfeEF02McrC2P | |
| 206760 | restriction endonuclease | |||
| ??? | R | EfeMcrCP (100% identity) | EfeEF02McrCP | |
| 206815 | R | EfeTMcrBP (100% identity) | EfeEF02McrBP | |
| 206820 | 113 aa hypothetical protein | |||