Methylomonas species DH-1 |
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Putative Methylomonas species DH-1 RM systems
Ref: Hur,D.H. et al. unpublished
REBASE ref # 21857
| Sequence length: | GenBank #: | |
| Chromosome: | 4,849,532 bp | CP014360 |
| plasmid unnamed: | 277,875 bp | CP014361 |
REBASE acronym: MspDH1
Org_num: 19026
All begin AYM39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 110 | metal-dependent hydrolase | |||
| 115 | R | MkoMY1ORF225P (97% identity) | MspDH1ORF130P | |
| 120 | 352 aa hypothetical protein | |||
| 125 | S | S.CmeDORF210680P (56% identity) | S.MspDH1ORF130P | |
| 130 | M | M.MkoEYORF390P (96% identity) | M.MspDH1ORF130P | |
| 135 | transposase | |||
| 2150 | 287 aa hypothetical protein | |||
| 2155 | M | M.Mko49807ORF11595P (98% identity) | M.MspDH1ORF2155P | |
| 2160 | 84 aa hypothetical protein | |||
| 2165 | 77 aa hypothetical protein | |||
| 2170 | S | S.MspLL1ORF18945P (58% identity) | S.MspDH1ORF2155P | |
| 2175 | 89 aa hypothetical protein | |||
| 2180 | 88 aa hypothetical protein | |||
| 2185 | twitching motility protein PilT | |||
| 2190 | 75 aa hypothetical protein | |||
| 2195 | R | MkoEYORF4260P (90% identity) | MspDH1ORF2155P | |
| 2200 | 104 aa hypothetical protein | |||
| 8995 | 62 aa hypothetical protein | |||
| 9000 | M | M.Mko45383ORF22600P (89% identity) | M.MspDH1ORF9000P | |
| 9005 | 343 aa hypothetical protein | |||
| 9010 | S | S.Tsp37S4ORF6415P (23% identity) | S1.MspDH1ORF9000P | |
| 9015 | S | S2.Gsp7ORF14260P (35% identity) | S2.MspDH1ORF9000P | |
| 9020 | 80 aa hypothetical protein | |||
| 9070 | 176 aa hypothetical protein | |||
| 9075 | M | M.MkoLM6ORF1473P (94% identity) | M.MspDH1ORF9075P | |
| 9080 | 78 aa hypothetical protein | |||
| 9085 | 73 aa hypothetical protein | |||
| 9090 | 90 aa hypothetical protein | |||
| 9095 | 112 aa hypothetical protein | |||
| 9100 | S | S.Aca329ORF26180P (48% identity) | S.MspDH1ORF9075P | |
| 9105 | cell filamentation protein Fic | |||
| 9110 | R | MkoLM6ORF1473P (96% identity) | MspDH1ORF9075P | |
| 9115 | 254 aa hypothetical protein | |||
| 18130 | metal-dependent hydrolase | |||
| 18135 | R | Mko49807ORF6120P (97% identity) | MspDH1ORF18145P | |
| 18140 | S | S.MkoLM6ORF3675P (58% identity) | S.MspDH1ORF18145P | |
| 18145 | M | M.MkoLM6ORF3675P (96% identity) | M.MspDH1ORF18145P | |
| 18150 | 287 aa hypothetical protein | |||
| 18455 | 84 aa hypothetical protein | |||
| 18460 | R | Mko45378ORF8340P (96% identity) | MspDH1ORF18475P | |
| 18465 | 117 aa hypothetical protein | |||
| 18470 | 77 aa hypothetical protein | |||
| 18475 | M | M.MkoLM6ORF3736P (98% identity) | M.MspDH1ORF18475P | |
| ??? | S | 155 aa hypothetical protein | S1.MspDH1ORF18475P | |
| 18480 | transposase | |||
| 18485 | S | S.MkoLM6ORF3736P (18% identity) | S2.MspDH1ORF18475P | |
| 18490 | 207 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 22520 | DNA-binding protein | |||
| ??? | M | M.Mko49807ORF16175P (92% identity) | M.MspDH1ORF22525P | |
| 22530 | aspartyl protease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1020 | 257 aa hypothetical protein | |||
| 1025 | M | M.Mko45383ORF15995P (91% identity) | GGCC | M.MspDH1ORF1025P |
| 1030 | transposase | |||
| 1275 | NAD(FAD)-utilizing dehydrogenase | |||
| 1280 | M | M.PaeRBORFCP (57% identity) | TGATCA | M.MspDH1ORF1280P |
| ??? | C | C.PspH12ORF18640P (56% identity) | C.MspDH1ORF1280P | |
| 1285 | R | PaeF070ORF6655P (69% identity) | TGATCA | MspDH1ORF1280P |
| 1290 | transposase | |||
| 5110 | preprotein translocase subunit SecG | |||
| 5120 | RM | MkoMY1ORF5070P (91% identity) | MspDH1ORF5120P | |
| 5125 | DNA polymerase subunit beta | |||
| 7275 | 233 aa hypothetical protein | |||
| 7280 | M | M.Mme9ORF1361P (67% identity) | M.MspDH1ORF7280P | |
| 7285 | addiction module toxin RelE | |||
| 13615 | plasmid-related protein | |||
| 13620 | M | M.MkoMY1ORF7745P (99% identity) | GTCGAC | M.MspDH1ORF13620P |
| 13625 | R | Mko49807ORF11120P (100% identity) | GTCGAC | MspDH1ORF13620P |
| 13630 | 77 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 22430 | RNA helicase | |||
| 22435 | M | M.Mko49807ORF16265P (100% identity) | M.MspDH1ORF22435P | |
| 22440 | 936 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7680 | abortive phage infection protein | |||
| 7685 | M | M.AdePR1ORF14195P (79% identity) | M.MspDH1ORF7685P | |
| 7690 | Zeta toxin family protein | |||
| 7695 | 61 aa hypothetical protein | |||
| 7700 | DNA polymerase subunit beta | |||
| 7705 | nucleotidyltransferase | |||
| 7710 | R | MkoMY1ORF14175P (99% identity) | MspDH1ORF7685P | |
| 7715 | 515 aa hypothetical protein | |||