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Putative Lactobacillus casei DPC6800 RM systems
Ref: Stefanovic,E. et al. Genome Announc 4 (2) (2016)
REBASE ref # 21654
Contig set: 3,053,365 bp
GenBank #: LNQD00000000 (NZ_LNQD00000000)
REBASE acronym: Lca6800
Org_num: 19140
All begin AC564_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
617 | Integrase | |||
618 | S | S2.Lpa401ORF10935P (62% identity) | S.Lca6800ORF618P | |
619 | 711 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2908 | Transcriptional regulator, Cro/CI family | |||
2909 | M | M.LpaDM001ORF4870P (65% identity) | CTGCAG | M.Lca6800ORF2909P |
2910 | 55 aa hypothetical protein | |||
??? | R | Lca163ORF1410P (57% identity) | CTGCAG | Lca6800ORF2909P |
2914 | 95 aa hypothetical protein | |||
1534 | 108 aa hypothetical protein | |||
1535 | M | M.Lpa1981ORF487P (99% identity) | CTSAG | M.Lca6800ORF1535P |
1536 | Conjugation related protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2925 | 148 aa hypothetical protein | |||
2926 | R | LrhVSI43ORF12130P (40% identity) | Lca6800ORF2926P | |
2927 | Mobile element protein |