Trueperella bernardiae LCDC 89-0504 |
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Putative Trueperella bernardiae LCDC 89-0504 RM systems
Ref: Bernier,A.M. and Bernard,K. Genome Announc 4 (1) (2016)
REBASE ref # 21633
Contig set: 2,028,874 bp
GenBank #: LNIZ00000000 (NZ_LNIZ00000000)
REBASE acronym: Tbe504
Org_num: 19130
All begin AQZ59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1808 | 195 aa hypothetical protein | |||
| 1809 | M | M.LarJ1ORF3170P (35% identity) | M.Tbe504ORF1809P | |
| 1810 | Cupin domain protein | |||
| 1454 | Surface protein G precursor | |||
| 1455 | M | M.Tbe8254ORF860P (95% identity) | M.Tbe504ORF1455P | |
| ??? | S | S1.CspD1552ORF4800P (27% identity) | S.Tbe504ORF1455P | |
| 1456 | R | Tbe8254ORF860P (99% identity) | Tbe504ORF1455P | |
| 1457 | Tyrosine recombinase XerS | |||
| 169 | 48 aa hypothetical protein | |||
| ??? | S | S.CspQ4385ORFAP (21% identity) | S1.Tbe504ORF171P | |
| 170 | S | S.Ega8736I (25% identity) | S2.Tbe504ORF171P | |
| 171 | M | M.AhaCORF1053P (80% identity) | M.Tbe504ORF171P | |
| 172 | R | Csp66ORF5990P (70% identity) | Tbe504ORF171P | |
| 173 | fluoride ion transporter CrcB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1766 | S-adenosylmethionine synthase | |||
| 1767 | M | M.Gho859ORF8135P (99% identity) | M.Tbe504ORF1767P | |
| 1768 | 61 aa hypothetical protein | |||
| 1503 | Ribosome-binding ATPase YchF | |||
| 1504 | M | M.Osp6506ORF3150029P (22% identity) | CCTAGG | M.Tbe504ORF1504P |
| 1505 | 81 aa hypothetical protein | |||
| 687 | S-adenosylmethionine synthase | |||
| 688 | M | M2.Cpy3ORF2255P (87% identity) | M1.Tbe504ORF688P | |
| 689 | M | M.Vca796ORF7480P (87% identity) | M2.Tbe504ORF688P | |
| 690 | 148 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 750 | 64 aa hypothetical protein | |||
| 751 | M | M.Aur0759ORF4110P (80% identity) | M.Tbe504ORF751P | |
| 752 | R | Tsp307ORF1690P (95% identity) | Tbe504ORF751P | |
| 753 | RNA polymerase-associated protein RapA | |||
| 665 | 306 aa hypothetical protein | |||
| 666 | R | Tbe8254ORF5925P (99% identity) | Tbe504ORF667P | |
| 667 | M | M.Tbe8254ORF5925P (98% identity) | M.Tbe504ORF667P | |
| 668 | Helix-turn-helix domain protein | |||