Vibrio cholerae O395 China |
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Putative Vibrio cholerae O395 China RM systems
Ref: Feng,L. et al. PLoS ONE 3 (12), E4053 (2008)
REBASE ref # 11047
| Sequence length: | GenBank #: | |
| chromosome I: | 3,024,078 bp | CP001235 (NC_012582) |
| chromosome II: | 1,111,222 bp | CP001236 (NC_012583) |
REBASE acronym: VchO395C
Org_num: 5429
All begin VC395_, VC395_A
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1878 | Restin-related protein | |||
| 1879 | R | VchW413ORF6655P (100% identity) | VchO395CORF1883P | |
| 1880 | 663 aa conserved hypothetical protein | |||
| 1881 | 470 aa conserved hypothetical protein | |||
| 1882 | S | S.VchV52ORF8545P (100% identity) | S.VchO395CORF1883P | |
| 1883 | M | M.VspNIH41ORF1746P (100% identity) | M.VchO395CORF1883P | |
| 1884 | 687 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2738 | ribulose-phosphate 3-epimerase | |||
| 2739 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchO395CDamP |
| 2740 | DamX-related protein | |||
| chromosome II | ||||
| 236 | guanosine 5'-monophosphate oxidoreductase | |||
| 237 | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.VchO395CORF237P |
| 238 | 638 aa conserved hypothetical protein | |||
| 439 | 63 aa hypothetical protein | |||
| 440 | M | M.VspNIH41ORF3529P (100% identity) | M.VchO395CORF440P | |
| 441 | 141 aa hypothetical protein | |||