Vibrio cholerae MJ-1236 |
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Putative Vibrio cholerae MJ-1236 RM systems
Ref: Vonstein,V. and Bartels,D. unpublished
REBASE ref # 5434
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,149,584 bp | CP001485 (NC_012668) |
| chromosome 2: | 1,086,784 bp | CP001486 (NC_012667) |
REBASE acronym: Vch1236
Org_num: 5434
All begin VCD_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1186 | 179 aa hypothetical protein | |||
| 1187 | C | C.VchVC53ORF2495P (100% identity) | C.Vch1236ORF1188P | |
| 1188 | M | M.Vch1236ORF3046P (100% identity) | M.Vch1236ORF1188P | |
| 1189 | S | S.Vch1236ORF3046P (100% identity) | S.Vch1236ORF1188P | |
| 1190 | R | Vch1236ORF3046P (100% identity) | Vch1236ORF1188P | |
| 1191 | 298 aa hypothetical protein | |||
| 2508 | 298 aa hypothetical protein | |||
| 2509 | R | Vch1236ORF3046P (100% identity) | Vch1236ORF2511P | |
| 2510 | S | S.Vch1236ORF3046P (100% identity) | S.Vch1236ORF2511P | |
| 2511 | M | M.Vch1236ORF3046P (100% identity) | M.Vch1236ORF2511P | |
| 2512 | C | C.VchVC53ORF2495P (100% identity) | C.Vch1236ORF2511P | |
| 2513 | 179 aa hypothetical protein | |||
| 2600 | 687 aa hypothetical protein | |||
| 2601 | M | M.VspNIH41ORF1746P (100% identity) | M.Vch1236ORF2601P | |
| 2602 | S | type I restriction-modification system | S.Vch1236ORF2601P | |
| 2603 | 470 aa hypothetical protein | |||
| 2604 | 663 aa hypothetical protein | |||
| 2605 | R | VchW413ORF6655P (100% identity) | Vch1236ORF2601P | |
| 2606 | 706 aa hypothetical protein | |||
| 2615 | 298 aa hypothetical protein | |||
| 2616 | R | Vch1236ORF3046P (100% identity) | Vch1236ORF2618P | |
| 2617 | S | S.Vch1236ORF3046P (100% identity) | S.Vch1236ORF2618P | |
| 2618 | M | M.Vch1236ORF3046P (100% identity) | M.Vch1236ORF2618P | |
| 2619 | C | C.VchVC53ORF2495P (100% identity) | C.Vch1236ORF2618P | |
| 2620 | 179 aa hypothetical protein | |||
| 3043 | 298 aa hypothetical protein | |||
| 3044 | R | Vch1236ORF2618P (100% identity) | Vch1236ORF3046P | |
| 3045 | S | S.Vch1236ORF2618P (100% identity) | S.Vch1236ORF3046P | |
| 3046 | M | M.Vch1236ORF2618P (100% identity) | M.Vch1236ORF3046P | |
| 3047 | C | C.VchVC53ORF2495P (100% identity) | C.Vch1236ORF3046P | |
| 3048 | 179 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1736 | DamX-related protein | |||
| 1737 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch1236DamP |
| 1738 | ribulose-phosphate 3-epimerase | |||
| 3717 | 885 aa hypothetical protein | |||
| 3718 | RM | VchG4222ORF1390P (100% identity) | Vch1236ORF3718P | |
| 3719 | 587 aa hypothetical protein | |||
| chromosome 2 | ||||
| 51 | 638 aa hypothetical protein | |||
| ??? | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch1236ORF52P |
| 53 | GMP reductase | |||
| 884 | 141 aa hypothetical protein | |||
| 885 | M | M.VspNIH41ORF3529P (100% identity) | M.Vch1236ORF885P | |
| 886 | 42 aa hypothetical protein | |||